Variant report

Variant	rs559121163
Chromosome Location	chr11:16000585-16000586
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:15993560..15998365-chr11:15999415..16005158,8	K562	blood:
2	chr11:15989562..15991887-chr11:15999668..16002450,2	K562	blood:
3	chr11:15989543..15991062-chr11:15998670..16001168,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832074	chr11:15927105-16100772	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	esv3330295	chr11:15999551-16001624	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3387965	chr11:15999926-16001124	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15990400-16011600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:15991600-16006600	Weak transcription	Liver	Liver
3	chr11:15991800-16006800	Weak transcription	Fetal Muscle Leg	muscle
4	chr11:15992400-16006600	Weak transcription	Duodenum Mucosa	Duodenum
5	chr11:15992600-16002400	Weak transcription	Stomach Mucosa	stomach
6	chr11:15992600-16006800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:15993000-16006800	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr11:15993000-16010600	Weak transcription	Pancreas	Pancrea
9	chr11:15993000-16012800	Weak transcription	Right Ventricle	heart
10	chr11:15993200-16009600	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr11:15993200-16010400	Weak transcription	Left Ventricle	heart
12	chr11:15993600-16006600	Weak transcription	Fetal Intestine Small	intestine
13	chr11:15995000-16002600	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr11:15995400-16006800	Weak transcription	Fetal Intestine Large	intestine
15	chr11:15997800-16006600	Weak transcription	Fetal Lung	lung
16	chr11:15998200-16011600	Weak transcription	Aorta	Aorta
17	chr11:15999000-16001600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr11:15999200-16006600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr11:15999200-16009800	Weak transcription	Psoas Muscle	Psoas
20	chr11:15999400-16006400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr11:15999400-16022800	Weak transcription	K562	blood
22	chr11:15999600-16007400	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr11:15999600-16009800	Weak transcription	Fetal Heart	heart

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