Variant report

Variant	rs559152863
Chromosome Location	chr3:34149750-34149751
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522881	chr3:33736126-34241686	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv1001599	chr3:34149575-34437701	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv536533	chr3:34149575-34437701	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34147800-34151600	Enhancers	Thymus	Thymus
2	chr3:34147800-34152600	Enhancers	Fetal Thymus	thymus
3	chr3:34147800-34153000	Enhancers	Dnd41	blood
4	chr3:34148400-34149800	Enhancers	Primary B cells from cord blood	blood
5	chr3:34148400-34149800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr3:34148600-34149800	Enhancers	Primary hematopoietic stem cells	blood
7	chr3:34149400-34151000	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr3:34149600-34150400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr3:34149600-34150600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr3:34149600-34151000	Enhancers	GM12878-XiMat	blood
11	chr3:34149600-34151200	Weak transcription	Primary B cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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