Variant report

Variant rs55916136
Chromosome Location chr4:3508591-3508592
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3491000-3510200 Weak transcription HMEC breast
2 chr4:3494200-3533200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr4:3494800-3509000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr4:3496600-3510200 Weak transcription NH-A brain
5 chr4:3496800-3510200 Weak transcription Placenta Amnion Placenta Amnion
6 chr4:3498200-3510200 Weak transcription HepG2 liver
7 chr4:3498800-3510200 Weak transcription Colon Smooth Muscle Colon
8 chr4:3499200-3510200 Weak transcription HUVEC blood vessel
9 chr4:3499200-3529600 Strong transcription Fetal Stomach stomach
10 chr4:3499800-3510200 Weak transcription Osteobl bone
11 chr4:3500200-3508600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr4:3500200-3510000 Weak transcription Rectal Smooth Muscle rectum
13 chr4:3500600-3531800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr4:3500600-3532000 Strong transcription Thymus Thymus
15 chr4:3500800-3521400 Strong transcription Fetal Muscle Leg muscle
16 chr4:3501000-3531600 Strong transcription Cortex derived primary cultured neurospheres brain
17 chr4:3501200-3508600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr4:3501200-3513000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr4:3501400-3510000 Weak transcription K562 blood
20 chr4:3501400-3510200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr4:3501400-3527200 Strong transcription Ovary ovary
22 chr4:3501400-3528000 Strong transcription Dnd41 blood
23 chr4:3501600-3509400 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr4:3501600-3510200 Weak transcription Fetal Heart heart
25 chr4:3501600-3511200 Strong transcription Fetal Intestine Large intestine
26 chr4:3501600-3529000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr4:3501800-3510200 Weak transcription Small Intestine intestine
28 chr4:3501800-3528800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr4:3502000-3516800 Strong transcription Fetal Intestine Small intestine
30 chr4:3502000-3531600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr4:3502200-3509200 Strong transcription Esophagus oesophagus
32 chr4:3502200-3525200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr4:3502400-3509000 Strong transcription Sigmoid Colon Sigmoid Colon
34 chr4:3502400-3510200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr4:3502400-3510400 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr4:3502400-3527200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr4:3502400-3528400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr4:3502600-3510200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr4:3502800-3522800 Strong transcription Brain Anterior Caudate brain
40 chr4:3502800-3531800 Strong transcription Primary T cells from cord blood blood
41 chr4:3503000-3509800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr4:3503000-3515400 Weak transcription GM12878-XiMat blood
43 chr4:3503000-3528000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr4:3503000-3530400 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr4:3503000-3530600 Strong transcription Placenta Placenta
46 chr4:3503000-3531600 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr4:3503200-3517200 Strong transcription Fetal Muscle Trunk muscle
48 chr4:3503200-3531400 Strong transcription Duodenum Mucosa Duodenum
49 chr4:3503400-3510200 Weak transcription Fetal Kidney kidney
50 chr4:3503400-3528800 Strong transcription Stomach Smooth Muscle stomach

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