The 2.0 version of rSNPBase

Variant report

Variant rs559173618
Chromosome Location chr2:112006428-112006429
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:111954800-112006800 Weak transcription HUVEC blood vessel
2 chr2:111975200-112008200 Weak transcription Pancreas Pancrea
3 chr2:111977600-112011400 Weak transcription A549 lung
4 chr2:111985800-112009600 Weak transcription Muscle Satellite Cultured Cells --
5 chr2:111993200-112008200 Weak transcription Aorta Aorta
6 chr2:111993200-112008200 Weak transcription Lung lung
7 chr2:111994000-112006800 Weak transcription Adipose Nuclei Adipose
8 chr2:111994000-112009600 Weak transcription Left Ventricle heart
9 chr2:111994400-112006600 Weak transcription Right Ventricle heart
10 chr2:111996400-112006600 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr2:111996400-112009000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:111997000-112008200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr2:112002600-112008200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr2:112003400-112006600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr2:112003400-112006800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:112004000-112006600 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr2:112004000-112006600 Strong transcription K562 blood
18 chr2:112004000-112006800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr2:112004000-112006800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr2:112004400-112006600 Strong transcription Dnd41 blood
21 chr2:112004600-112006800 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr2:112004600-112007600 Weak transcription Ovary ovary
23 chr2:112004600-112009200 Weak transcription Fetal Muscle Leg muscle
24 chr2:112005200-112007800 Weak transcription HepG2 liver
25 chr2:112005200-112009000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:112005600-112007200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:112005600-112007800 Weak transcription HSMMtube muscle
28 chr2:112005600-112008200 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr2:112005600-112008200 Weak transcription NHDF-Ad bronchial
30 chr2:112005600-112008600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:112005600-112009000 Weak transcription H9 Cell Line embryonic stem cell
32 chr2:112005600-112015800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr2:112005800-112007800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:112005800-112009000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr2:112006000-112006800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr2:112006000-112008600 Weak transcription NHLF lung
37 chr2:112006200-112008000 Weak transcription HSMM muscle
38 chr2:112006200-112008000 Weak transcription Osteobl bone
39 chr2:112006200-112009000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr2:112006200-112009400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr2:112006200-112020200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:112006400-112009000 Weak transcription NHEK skin
43 chr2:112006400-112011600 Weak transcription NH-A brain

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Last update: Aug 31, 2015