Variant report

Variant	rs559204702
Chromosome Location	chr13:92000118-92000119
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr13:91999153-92001929	H1-hESC	embryonic stem cell:	n/a	n/a
2	TCF7L2	chr13:91999245-92001683	HCT-116	colon:	n/a	n/a
3	MAZ	chr13:91998533-92004929	K562	blood:	n/a	chr13:91999821-91999831 chr13:91998551-91998561 chr13:92001061-92001071 chr13:92001123-92001132 chr13:92000750-92000759
4	TEAD4	chr13:91999498-92000178	ECC-1	luminal epithelium:	n/a	n/a
5	YY1	chr13:91999513-92000401	GM12892	blood:	n/a	chr13:91999968-91999977 chr13:91999966-91999980 chr13:91999963-91999977 chr13:91999766-91999780 chr13:92000222-92000236 chr13:91999763-91999777 chr13:91999971-91999980 chr13:91999765-91999774 chr13:91999818-91999832 chr13:91999922-91999936 chr13:91999968-91999979
6	POLR2A	chr13:91998902-92001951	GM19099	blood:	n/a	n/a
7	POLR2A	chr13:91999774-92000214	SK-N-MC	brain:	n/a	n/a
8	POLR2A	chr13:91999502-92001984	Hela-S3	cervix:	n/a	n/a
9	YY1	chr13:91999419-92000376	GM12891	blood:	n/a	chr13:91999968-91999977 chr13:91999966-91999980 chr13:91999963-91999977 chr13:91999766-91999780 chr13:92000222-92000236 chr13:91999763-91999777 chr13:91999971-91999980 chr13:91999765-91999774 chr13:91999818-91999832 chr13:91999922-91999936 chr13:91999968-91999979
10	POLR2A	chr13:91999396-92000234	H1-neurons	neurons:	n/a	n/a
11	TAF1	chr13:91999741-92000268	SK-N-SH	brain:	n/a	n/a
12	POLR2A	chr13:91998938-92001748	Raji	blood:	n/a	n/a
13	POLR2A	chr13:91998832-92013433	K562	blood:	n/a	n/a
14	POLR2A	chr13:91998968-92003731	K562	blood:	n/a	n/a
15	BCLAF1	chr13:91998654-92000393	K562	blood:	n/a	chr13:91999970-91999979 chr13:91999772-91999785 chr13:91999759-91999772 chr13:91999967-91999976 chr13:91999968-91999981 chr13:91999967-91999980 chr13:92000044-92000057 chr13:91999923-91999936
16	BACH1	chr13:91998969-92000215	K562	blood:	n/a	n/a
17	ZNF143	chr13:91999244-92000141	H1-hESC	embryonic stem cell:	n/a	n/a
18	RELA	chr13:91998965-92000176	GM18951	blood:	n/a	chr13:91999115-91999124 chr13:91999115-91999124
19	YY1	chr13:91999838-92000256	H1-hESC	embryonic stem cell:	n/a	chr13:91999968-91999977 chr13:91999966-91999980 chr13:91999963-91999977 chr13:92000222-92000236 chr13:91999971-91999980 chr13:91999922-91999936 chr13:91999968-91999979
20	GABPA	chr13:91999077-92000290	K562	blood:	n/a	chr13:91999848-91999857 chr13:91999624-91999633 chr13:91999821-91999830 chr13:91999637-91999651
21	CREB1	chr13:91998190-92005186	K562	blood:	n/a	n/a
22	CREB1	chr13:91999424-92000285	GM12878	blood:	n/a	n/a
23	GABPA	chr13:91999062-92001679	K562	blood:	n/a	chr13:91999848-91999857 chr13:92000697-92000706 chr13:92000739-92000748 chr13:91999624-91999633 chr13:91999821-91999830 chr13:91999637-91999651
24	MAZ	chr13:91999300-92001581	Hela-S3	cervix:	n/a	chr13:91999821-91999831 chr13:92001061-92001071 chr13:92001123-92001132 chr13:92000750-92000759
25	IRF1	chr13:91999051-92000236	K562	blood:	n/a	chr13:91999820-91999834 chr13:92000024-92000038 chr13:91999672-91999686
26	POLR2A	chr13:91999007-92004670	GM18951	blood:	n/a	n/a
27	TAF1	chr13:91999389-92001771	K562	blood:	n/a	n/a
28	POLR2A	chr13:91999055-92001790	GM12892	blood:	n/a	n/a
29	MXI1	chr13:91998376-92005054	K562	blood:	n/a	n/a
30	RELA	chr13:91997747-92000138	GM19193	blood:	n/a	chr13:91999115-91999124 chr13:91998500-91998509 chr13:91998500-91998509 chr13:91999115-91999124
31	TCF7L2	chr13:91999208-92000239	Hela-S3	cervix:	n/a	n/a
32	POLR2A	chr13:91999113-92002032	GM15510	blood:	n/a	n/a
33	POLR2A	chr13:91998860-92001773	GM19193	blood:	n/a	n/a
34	CUX1	chr13:91999973-92000170	K562	blood:	n/a	n/a
35	MYC	chr13:91999848-92000119	GM12878	blood:	n/a	n/a
36	REST	chr13:91999499-92000152	K562	blood:	n/a	chr13:91999792-91999805 chr13:91999818-91999831 chr13:91999714-91999727
37	YY1	chr13:91999151-92001703	K562	blood:	n/a	chr13:91999968-91999977 chr13:92001025-92001047 chr13:92000669-92000680 chr13:92000666-92000677 chr13:91999966-91999980 chr13:91999963-91999977 chr13:92000863-92000877 chr13:92001025-92001035 chr13:91999766-91999780 chr13:92000799-92000808 chr13:92001021-92001030 chr13:92001138-92001149 chr13:92000222-92000236 chr13:92000668-92000677 chr13:92001142-92001153 chr13:91999763-91999777 chr13:92001022-92001042 chr13:91999971-91999980 chr13:92001601-92001612 chr13:92001089-92001098 chr13:91999765-91999774 chr13:91999818-91999832 chr13:92001320-92001329 chr13:92000671-92000680 chr13:91999922-91999936 chr13:91999968-91999979 chr13:92001381-92001395 chr13:92000668-92000682
38	CTCF	chr13:92000100-92000250	AG04449	skin:	n/a	n/a
39	TBL1XR1	chr13:91998914-92005070	K562	blood:	n/a	n/a
40	CHD2	chr13:91998857-92004937	K562	blood:	n/a	chr13:91999921-91999931 chr13:92000220-92000230 chr13:91999849-91999859 chr13:91999694-91999704 chr13:91999681-91999691
41	RFX5	chr13:91999142-92000141	Hela-S3	cervix:	n/a	n/a
42	EBF1	chr13:91999768-92000197	GM12878	blood:	n/a	n/a
43	PML	chr13:91998755-92014623	K562	blood:	n/a	chr13:92004530-92004538
44	CCNT2	chr13:91999216-92001980	K562	blood:	n/a	chr13:92000025-92000034 chr13:92001155-92001164 chr13:92001601-92001610 chr13:92001181-92001190
45	TAF7	chr13:91999485-92000333	K562	blood:	n/a	n/a
46	YY1	chr13:91999209-92001745	K562	blood:	n/a	chr13:91999968-91999977 chr13:92001025-92001047 chr13:92000669-92000680 chr13:92000666-92000677 chr13:91999966-91999980 chr13:91999963-91999977 chr13:92000863-92000877 chr13:92001025-92001035 chr13:91999766-91999780 chr13:92000799-92000808 chr13:92001021-92001030 chr13:92001138-92001149 chr13:92000222-92000236 chr13:92000668-92000677 chr13:92001142-92001153 chr13:91999763-91999777 chr13:92001022-92001042 chr13:91999971-91999980 chr13:92001601-92001612 chr13:92001089-92001098 chr13:91999765-91999774 chr13:91999818-91999832 chr13:92001320-92001329 chr13:92000671-92000680 chr13:91999922-91999936 chr13:91999968-91999979 chr13:92001381-92001395 chr13:92000668-92000682
47	POLR2A	chr13:91999610-92000323	PFSK-1	brain:	n/a	n/a
48	MAZ	chr13:91999294-92000141	HepG2	liver:	n/a	chr13:91999821-91999831
49	ELK4	chr13:91999526-92000139	HEK293	kidney:	n/a	n/a
50	SIN3AK20	chr13:91999384-92000316	PANC-1	pancreas:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:92000113-92000163	HRCEpiC	kidney:	n/a
2	chr13:92000113-92000163	GM12878	blood:	n/a
3	chr13:92000113-92000163	CMK	blood:	n/a
4	chr13:92000113-92000163	GM19239	blood:	n/a
5	chr13:92000113-92000163	HepG2	liver:	n/a
6	chr13:92000113-92000163	ProgFib	skin:	n/a
7	chr13:92000113-92000163	MCF-7	breast:	n/a
8	chr13:92000113-92000163	HEK293	kidney:	embryo
9	chr13:92000113-92000163	HCPEpiC	choroid plexus:	n/a
10	chr13:92000113-92000163	HNPCEpiC	eye:	n/a
11	chr13:92000113-92000163	Hela-S3	cervix:	n/a
12	chr13:92000113-92000163	NB4	blood:	n/a
13	chr13:92000113-92000163	GM12892	blood:	n/a
14	chr13:92000113-92000163	AoSMC	blood vessel:	n/a
15	chr13:92000113-92000163	NHDF-neo	bronchial:	n/a
16	chr13:92000113-92000163	GM12891	blood:	n/a
17	chr13:92000113-92000163	HEEpiC	esophagus:	n/a
18	chr13:92000113-92000163	HMEC	breast:	n/a
19	chr13:92000113-92000163	IMR90	lung:	fetal
20	chr13:92000113-92000163	PFSK-1	brain:	n/a
21	chr13:92000113-92000163	PrEC	prostate:	n/a
22	chr13:92000113-92000163	Jurkat	blood:	n/a
23	chr13:92000113-92000163	A549	lung:	n/a
24	chr13:92000113-92000163	HL-60	blood:	n/a
25	chr13:92000113-92000163	T-47D	breast:	n/a
26	chr13:92000113-92000163	AG04449	skin:	fetal
27	chr13:92000113-92000163	K562	blood:	n/a
28	chr13:92000113-92000163	ovcar-3	ovarian:	n/a
29	chr13:92000113-92000163	Caco-2	colon:	n/a
30	chr13:92000113-92000163	HCM	heart:	n/a
31	chr13:92000113-92000163	HUVEC	blood vessel:	n/a
32	chr13:92000113-92000163	HIPEpiC	eye:	n/a
33	chr13:92000113-92000163	SK-N-SH_RA	brain:	n/a
34	chr13:92000113-92000163	SAEC	small airway:	n/a
35	chr13:92000113-92000163	BE2_C	brain:	n/a
36	chr13:92000113-92000163	NH-A	brain:	n/a
37	chr13:92000113-92000163	SKMC	muscle:	n/a
38	chr13:92000113-92000163	RPTEC	kidney:	n/a
39	chr13:92000113-92000163	AG04450	lung:	fetal
40	chr13:92000113-92000163	U87	brain:	n/a
41	chr13:92000113-92000163	NHBE	bronchial:	n/a
42	chr13:92000113-92000163	PANC-1	pancreas:	n/a
43	chr13:92000113-92000163	MCF10A-Er-Src	breast:	n/a
44	chr13:92000113-92000163	SK-N-SH	brain:	n/a
45	chr13:92000113-92000163	HPAEpiC	pulmonary alveolar:	n/a
46	chr13:92000113-92000163	HRPEpiC	eye:	n/a
47	chr13:92000113-92000163	AG09309	skin:	n/a
48	chr13:92000113-92000163	BJ	skin:	n/a
49	chr13:92000113-92000163	NT2-D1	testis:	n/a
50	chr13:92000113-92000163	HCT-116	colon:	n/a

No.	Distal block	Cell Line	Cell type
1	chr13:91998556..92002777-chr9:134147037..134155728,18	K562	blood:
2	chr11:65190192..65192335-chr13:91999791..92002488,2	K562	blood:
3	chr13:91999405..92003025-chr22:23522118..23524074,3	K562	blood:
4	chr11:65686358..65687859-chr13:91999900..92001660,2	K562	blood:
5	chr13:91999520..92000389-chr2:47403088..47403880,2	Hela-S3	cervix:
6	chr1:33004093..33007091-chr13:91999311..92002195,5	K562	blood:
7	chr13:91999673..92001318-chr4:100870740..100872493,2	K562	blood:
8	chr13:91998254..92002103-chr22:22898499..22902488,4	K562	blood:
9	chr1:33004072..33007091-chr13:91999311..92001675,4	K562	blood:
10	chr13:91998254..92001076-chr22:22898499..22901171,2	K562	blood:
11	chr13:91999607..92001112-chr6:33239163..33241434,2	K562	blood:
12	chr13:91999600..92001415-chr13:95232810..95234468,2	K562	blood:
13	chr13:91999526..92000349-chr19:23432834..23433455,2	NB4	blood:
14	chr12:49656589..49659420-chr13:91999028..92001178,2	K562	blood:
15	chr13:45910919..45912639-chr13:91999905..92002237,2	K562	blood:
16	chr13:91999561..92000380-chr5:10563826..10564497,2	NB4	blood:
17	chr13:91998892..92001087-chrX:152952239..152954221,2	K562	blood:
18	chr13:91998556..92001592-chr9:134150017..134155728,10	K562	blood:
19	chr13:91999417..92000348-chr16:88922774..88923477,2	NB4	blood:
20	chr13:92000043..92002771-chr9:133971829..133974734,2	K562	blood:
21	chr13:91999993..92001632-chr2:85765128..85766944,2	K562	blood:
22	chr13:91999380..92000118-chr9:4679003..4679675,2	NB4	blood:
23	chr13:91999950..92001498-chr6:27113724..27116525,2	K562	blood:
24	chr13:91998776..92000555-chr13:92831916..92834550,2	K562	blood:
25	chr13:91999624..92000352-chr19:40596463..40597085,2	Hela-S3	cervix:
26	chr13:91999905..92002821-chr22:19420290..19421943,2	K562	blood:
27	chr1:78468848..78471469-chr13:91999787..92002475,2	K562	blood:
28	chr13:91922956..91924872-chr13:91999191..92001609,2	K562	blood:
29	chr13:91999220..92000207-chr19:59055377..59055970,2	HCT-116	colon:
30	chr1:167905256..167905963-chr13:91999310..92000299,2	Hela-S3	cervix:
31	chr13:92000031..92002100-chr13:111364097..111366110,2	K562	blood:
32	chr13:91999824..92001564-chr22:17082538..17085283,2	K562	blood:
33	chr13:91998997..92001437-chr21:34913809..34915620,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GPC5-1	chr13:92000074-92000213	ENSG00000215417
2	lnc-GPC5-1	chr13:92000074-92000213	ENSG00000215417.5
3	lnc-GPC5-1	chr13:92000074-92000213	NONHSAT034665
4	lnc-GPC5-1	chr13:92000074-92000213	NR_027349

Variant related genes	Relation type
MIR17HG	TF binding region
MIR17HG	CpG island
ENSG00000153487	Chromatin interaction
ENSG00000265565	Chromatin interaction
ENSG00000167553	Chromatin interaction
ENSG00000164236	Chromatin interaction
ENSG00000159131	Chromatin interaction
ENSG00000186716	Chromatin interaction
ENSG00000220891	Chromatin interaction
ENSG00000126878	Chromatin interaction
ENSG00000164032	Chromatin interaction
ENSG00000160062	Chromatin interaction
ENSG00000130821	Chromatin interaction
ENSG00000214178	Chromatin interaction
ENSG00000231500	Chromatin interaction
ENSG00000199477	Chromatin interaction
ENSG00000175573	Chromatin interaction
ENSG00000106993	Chromatin interaction
ENSG00000143164	Chromatin interaction
ENSG00000134905	Chromatin interaction
ENSG00000196081	Chromatin interaction
ENSG00000168906	Chromatin interaction
ENSG00000141012	Chromatin interaction
ENSG00000258101	Chromatin interaction
ENSG00000162616	Chromatin interaction
ENSG00000126882	Chromatin interaction
ENSG00000185686	Chromatin interaction
ENSG00000143933	Chromatin interaction
ENSG00000100181	Chromatin interaction
ENSG00000088451	Chromatin interaction
ENSG00000273338	Chromatin interaction
ENSG00000197903	Chromatin interaction
ENSG00000269749	Chromatin interaction
ENSG00000175550	Chromatin interaction
ENSG00000269296	Chromatin interaction
ENSG00000184825	Chromatin interaction
ENSG00000245322	Chromatin interaction
ENSG00000143158	Chromatin interaction
ENSG00000159140	Chromatin interaction
ENSG00000197782	Chromatin interaction
ENSG00000229287	Chromatin interaction
ENSG00000130822	Chromatin interaction
ENSG00000130726	Chromatin interaction
ENSG00000273061	Chromatin interaction
ENSG00000236794	Chromatin interaction
ENSG00000223501	Chromatin interaction
ENSG00000245532	Chromatin interaction
ENSG00000185608	Chromatin interaction

Extended variants
information (count: 41 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:41 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042947	chr13:91571040-92416897	Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1946 gene(s)	inside rSNPs	diseases
2	nsv541871	chr13:91571040-92416897	Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1946 gene(s)	inside rSNPs	diseases
3	esv1803618	chr13:91669587-92277699	Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1945 gene(s)	inside rSNPs	diseases
4	nsv1050259	chr13:91759549-92152078	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1944 gene(s)	inside rSNPs	diseases
5	nsv541872	chr13:91759549-92152078	Enhancers Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1944 gene(s)	inside rSNPs	diseases
6	nsv832679	chr13:91859467-92030220	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1943 gene(s)	inside rSNPs	diseases
7	esv1794000	chr13:91983910-92001350	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
8	esv1797111	chr13:91983910-92001472	Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
9	nsv562694	chr13:91992157-92001119	Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
10	esv1796195	chr13:91992157-92001472	Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
11	esv1840145	chr13:91992157-92001472	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
12	nsv562695	chr13:91992157-92001472	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
13	esv1795019	chr13:91992157-92003589	Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1146 gene(s)	inside rSNPs	diseases
14	esv3404637	chr13:91998776-92001324	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
15	esv3347426	chr13:91999026-92002299	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
16	esv3375166	chr13:91999176-92001724	Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	63 gene(s)	inside rSNPs	diseases
17	esv3422100	chr13:91999576-92002124	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
18	esv14252	chr13:91999635-92001437	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
19	nsv562696	chr13:91999737-92000636	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
20	nsv562697	chr13:91999737-92001063	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
21	esv1818531	chr13:91999737-92001119	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
22	nsv562698	chr13:91999737-92001199	Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
23	esv1791806	chr13:91999737-92001350	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
24	esv1795167	chr13:91999737-92001350	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
25	esv1799412	chr13:91999737-92001350	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
26	esv1802591	chr13:91999737-92001350	Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
27	esv1838373	chr13:91999737-92001350	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
28	nsv562699	chr13:91999737-92001350	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
29	esv1801178	chr13:91999737-92001472	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
30	esv1834928	chr13:91999737-92001472	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
31	esv1796361	chr13:91999737-92003589	Transcr. at gene 5' and 3' Genic enhancers Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
32	esv1802358	chr13:91999737-92003589	Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
33	esv1802567	chr13:91999737-92003589	Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
34	esv1808768	chr13:91999737-92003589	Active TSS Flanking Active TSS Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
35	esv1815968	chr13:91999737-92003589	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
36	esv1834079	chr13:91999737-92003589	Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
37	esv1834506	chr13:91999737-92003589	Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Enhancers Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
38	esv1839472	chr13:91999737-92003589	Transcr. at gene 5' and 3' Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
39	esv1840965	chr13:91999737-92003589	Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1145 gene(s)	inside rSNPs	diseases
40	esv1802171	chr13:91999737-92015977	Active TSS Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1940 gene(s)	inside rSNPs	diseases
41	esv1836699	chr13:92000027-92001350	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:91999000-92001000	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr13:91999000-92001400	Active TSS	Rectal Smooth Muscle	rectum
3	chr13:91999000-92001600	Active TSS	H1 Cell Line	embryonic stem cell
4	chr13:91999000-92001600	Active TSS	Brain Angular Gyrus	brain
5	chr13:91999000-92001600	Active TSS	Brain Inferior Temporal Lobe	brain
6	chr13:91999000-92001800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr13:91999000-92001800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr13:91999000-92001800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
9	chr13:91999000-92001800	Active TSS	Brain Substantia Nigra	brain
10	chr13:91999000-92002200	Active TSS	iPS-15b Cell Line	embryonic stem cell
11	chr13:91999000-92002200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr13:91999000-92002200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr13:91999000-92002200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr13:91999000-92002400	Active TSS	ES-I3 Cell Line	embryonic stem cell
15	chr13:91999000-92002800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr13:91999000-92003000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr13:91999200-92001400	Active TSS	HUES64 Cell Line	embryonic stem cell
18	chr13:91999200-92001400	Active TSS	Left Ventricle	heart
19	chr13:91999200-92001600	Active TSS	Gastric	stomach
20	chr13:91999200-92001800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr13:91999200-92001800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr13:91999200-92001800	Active TSS	Pancreatic Islets	Pancreatic Islet
23	chr13:91999200-92001800	Active TSS	Ovary	ovary
24	chr13:91999200-92002000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr13:91999200-92002000	Active TSS	Colonic Mucosa	Colon
26	chr13:91999200-92002000	Active TSS	Psoas Muscle	Psoas
27	chr13:91999200-92002000	Active TSS	Right Ventricle	heart
28	chr13:91999200-92002200	Active TSS	Breast Myoepithelial Primary Cells	Breast
29	chr13:91999200-92002400	Active TSS	H9 Cell Line	embryonic stem cell
30	chr13:91999200-92002400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr13:91999400-92000600	Bivalent/Poised TSS	Brain Germinal Matrix	brain
32	chr13:91999400-92001400	Active TSS	HUES6 Cell Line	embryonic stem cell
33	chr13:91999400-92001400	Active TSS	iPS-18 Cell Line	embryonic stem cell
34	chr13:91999400-92001400	Active TSS	iPS-20b Cell Line	embryonic stem cell
35	chr13:91999400-92001600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr13:91999400-92001600	Active TSS	HUES48 Cell Line	embryonic stem cell
37	chr13:91999400-92001600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
38	chr13:91999400-92001600	Active TSS	Brain Anterior Caudate	brain
39	chr13:91999400-92001600	Active TSS	Brain Hippocampus Middle	brain
40	chr13:91999400-92001600	Active TSS	Duodenum Smooth Muscle	Duodenum
41	chr13:91999400-92001600	Active TSS	Esophagus	oesophagus
42	chr13:91999400-92001600	Active TSS	Lung	lung
43	chr13:91999400-92001600	Transcr. at gene 5' and 3'	Right Atrium	heart
44	chr13:91999400-92001600	Active TSS	Sigmoid Colon	Sigmoid Colon
45	chr13:91999400-92001600	Active TSS	Skeletal Muscle Male	skeletal muscle
46	chr13:91999400-92001600	Active TSS	Small Intestine	intestine
47	chr13:91999400-92001600	Active TSS	Stomach Mucosa	stomach
48	chr13:91999400-92001600	Active TSS	Spleen	Spleen
49	chr13:91999400-92001800	Active TSS	Brain Cingulate Gyrus	brain
50	chr13:91999400-92001800	Active TSS	Placenta Amnion	Placenta Amnion

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