Variant report

Variant rs559299005
Chromosome Location chr20:16593344-16593345
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16589200-16596000 Weak transcription Colon Smooth Muscle Colon
2 chr20:16589400-16593400 Weak transcription HSMMtube muscle
3 chr20:16589800-16596200 Weak transcription Fetal Kidney kidney
4 chr20:16590000-16596000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr20:16590000-16596400 Weak transcription Ovary ovary
6 chr20:16590000-16602400 Weak transcription Right Atrium heart
7 chr20:16590400-16595800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr20:16590400-16595800 Weak transcription Small Intestine intestine
9 chr20:16590400-16596200 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr20:16590600-16594000 Weak transcription Fetal Brain Male brain
11 chr20:16590800-16595400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr20:16592200-16597000 Enhancers Fetal Muscle Leg muscle
13 chr20:16592400-16594400 Enhancers Sigmoid Colon Sigmoid Colon
14 chr20:16592600-16597400 Enhancers Fetal Lung lung
15 chr20:16592600-16597600 Enhancers Fetal Stomach stomach
16 chr20:16593000-16595800 Weak transcription Fetal Intestine Small intestine
17 chr20:16593000-16596000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr20:16593000-16596400 Weak transcription Colonic Mucosa Colon
19 chr20:16593200-16593800 Enhancers Fetal Muscle Trunk muscle
20 chr20:16593200-16595800 Weak transcription Fetal Intestine Large intestine

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