Variant report

Variant	rs559305230
Chromosome Location	chr8:118032378-118032379
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530386	chr8:117509968-118391406	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv1027920	chr8:117983619-118079816	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv539732	chr8:117983619-118079816	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv527876	chr8:118012265-118037316	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1032976	chr8:118032075-118065907	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118031400-118032400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:118031400-118032400	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr8:118031400-118032400	Enhancers	HSMMtube	muscle
4	chr8:118031600-118032400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr8:118031600-118032400	Enhancers	H9 Cell Line	embryonic stem cell
6	chr8:118031600-118032400	Enhancers	Duodenum Smooth Muscle	Duodenum
7	chr8:118031800-118032400	Enhancers	H1 Cell Line	embryonic stem cell
8	chr8:118031800-118032400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr8:118031800-118032400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr8:118031800-118032400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr8:118031800-118032400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr8:118031800-118032400	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr8:118031800-118032400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr8:118031800-118032400	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr8:118031800-118032400	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr8:118031800-118032400	Enhancers	Stomach Smooth Muscle	stomach
17	chr8:118031800-118032400	Enhancers	HSMM	muscle
18	chr8:118032000-118032400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
19	chr8:118032000-118032400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr8:118032000-118032400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr8:118032000-118032400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr8:118032200-118032400	Enhancers	Fetal Heart	heart

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