Variant report

Variant rs559307874
Chromosome Location chr5:177535685-177535686
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:177532000-177539800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr5:177532400-177535800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr5:177532400-177539800 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr5:177532400-177539800 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr5:177532400-177539800 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr5:177532800-177536600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr5:177533000-177536800 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr5:177533200-177536600 Enhancers Placenta Placenta
9 chr5:177533400-177536600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr5:177533600-177536400 Enhancers NHEK skin
11 chr5:177533800-177536400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr5:177533800-177536600 Enhancers HMEC breast
13 chr5:177533800-177537400 Enhancers Fetal Muscle Leg muscle
14 chr5:177534000-177536000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
15 chr5:177534000-177536600 Bivalent Enhancer Fetal Muscle Trunk muscle
16 chr5:177534200-177535800 Weak transcription Gastric stomach
17 chr5:177534200-177536400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:177534400-177539600 Weak transcription GM12878-XiMat blood
19 chr5:177534800-177535800 Enhancers H1 Cell Line embryonic stem cell
20 chr5:177534800-177535800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr5:177534800-177536000 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr5:177534800-177536000 Enhancers HUES6 Cell Line embryonic stem cell
23 chr5:177534800-177536200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr5:177534800-177536400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr5:177535000-177536000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
26 chr5:177535000-177536000 Enhancers Colonic Mucosa Colon
27 chr5:177535000-177536600 Enhancers Fetal Heart heart
28 chr5:177535000-177536800 Enhancers Primary B cells from cord blood blood
29 chr5:177535200-177535800 Enhancers Hela-S3 cervix
30 chr5:177535200-177536600 Enhancers Primary mononuclear cells fromperipheralblood Blood
31 chr5:177535200-177536600 Enhancers Stomach Mucosa stomach
32 chr5:177535400-177535800 Flanking Active TSS Esophagus oesophagus
33 chr5:177535400-177535800 Enhancers Spleen Spleen
34 chr5:177535400-177536000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
35 chr5:177535400-177536400 Enhancers Primary neutrophils fromperipheralblood blood
36 chr5:177535400-177536400 Enhancers Rectal Mucosa Donor 29 rectum
37 chr5:177535400-177536400 Enhancers Rectal Mucosa Donor 31 rectum
38 chr5:177535400-177536600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
39 chr5:177535400-177536600 Enhancers Lung lung
40 chr5:177535400-177536600 Enhancers Sigmoid Colon Sigmoid Colon
41 chr5:177535400-177536600 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
42 chr5:177535400-177536800 Enhancers Primary B cells from peripheral blood blood
43 chr5:177535600-177535800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr5:177535600-177536000 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr5:177535600-177536200 Enhancers Right Ventricle heart
46 chr5:177535600-177536400 Enhancers Primary hematopoietic stem cells blood
47 chr5:177535600-177536400 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr5:177535600-177536400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr5:177535600-177536400 Enhancers Adipose Nuclei Adipose
50 chr5:177535600-177536600 Enhancers Primary Natural Killer cells fromperipheralblood blood

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