Variant report

Variant	rs559328848
Chromosome Location	chr11:119760476-119760477
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051526	chr11:119750335-119775811	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1038232	chr11:119759344-119785065	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119746000-119762400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:119747200-119768200	Weak transcription	Fetal Intestine Small	intestine
3	chr11:119747600-119762400	Weak transcription	Esophagus	oesophagus
4	chr11:119758600-119761600	Enhancers	Right Ventricle	heart
5	chr11:119758800-119764000	Enhancers	Brain Hippocampus Middle	brain
6	chr11:119759400-119763800	Enhancers	Brain Anterior Caudate	brain
7	chr11:119759800-119761800	Weak transcription	Fetal Brain Male	brain
8	chr11:119760000-119760800	Flanking Active TSS	Fetal Heart	heart
9	chr11:119760000-119760800	Weak transcription	Left Ventricle	heart
10	chr11:119760000-119762600	Weak transcription	Right Atrium	heart
11	chr11:119760000-119764200	Enhancers	Brain Substantia Nigra	brain
12	chr11:119760200-119763000	Enhancers	Brain Angular Gyrus	brain
13	chr11:119760200-119764600	Enhancers	Brain Cingulate Gyrus	brain
14	chr11:119760400-119760800	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr11:119760400-119760800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
16	chr11:119760400-119761600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr11:119760400-119761800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
18	chr11:119760400-119763800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr11:119760400-119764200	Enhancers	Brain Inferior Temporal Lobe	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links