Variant report

Variant	rs559348715
Chromosome Location	chr3:177666080-177666081
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931055	chr3:177229521-177889872	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv829805	chr3:177662113-177805003	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv997975	chr3:177664921-177719623	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:177662600-177666400	Weak transcription	Fetal Thymus	thymus
2	chr3:177663200-177666800	Weak transcription	Primary B cells from cord blood	blood
3	chr3:177663800-177666800	Weak transcription	Thymus	Thymus
4	chr3:177664000-177666200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr3:177664000-177666400	Weak transcription	Dnd41	blood
6	chr3:177665400-177666600	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr3:177665600-177666200	Weak transcription	HSMM	muscle
8	chr3:177665800-177666200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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