Variant report

Variant rs55938119
Chromosome Location chr12:51511745-51511746
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51477400-51518200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:51477800-51518400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:51477800-51518400 Weak transcription Pancreas Pancrea
4 chr12:51477800-51550200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr12:51483800-51513400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:51484000-51519400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr12:51485000-51513200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr12:51485800-51513200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr12:51487200-51513000 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr12:51487200-51513200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr12:51487600-51512000 Strong transcription Primary T cells fromperipheralblood blood
12 chr12:51488400-51526600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:51493600-51512600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr12:51494400-51515600 Weak transcription Stomach Mucosa stomach
15 chr12:51494600-51518200 Weak transcription Esophagus oesophagus
16 chr12:51494800-51518400 Weak transcription Aorta Aorta
17 chr12:51496400-51523400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr12:51499200-51513000 Strong transcription Primary B cells from peripheral blood blood
19 chr12:51499800-51513400 Strong transcription Fetal Thymus thymus
20 chr12:51500000-51512800 Strong transcription Fetal Muscle Leg muscle
21 chr12:51500800-51513200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr12:51501000-51517400 Weak transcription Psoas Muscle Psoas
23 chr12:51501000-51521000 Weak transcription Rectal Smooth Muscle rectum
24 chr12:51501400-51512400 Weak transcription Fetal Brain Male brain
25 chr12:51501800-51518400 Weak transcription Spleen Spleen
26 chr12:51502200-51511800 Weak transcription Brain Cingulate Gyrus brain
27 chr12:51502200-51527200 Weak transcription Colonic Mucosa Colon
28 chr12:51502400-51512400 Weak transcription HepG2 liver
29 chr12:51502600-51518400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr12:51502800-51531800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr12:51503000-51512400 Weak transcription Small Intestine intestine
32 chr12:51503000-51512800 Strong transcription Primary monocytes fromperipheralblood blood
33 chr12:51503000-51518400 Weak transcription NHLF lung
34 chr12:51503200-51513400 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr12:51503200-51518600 Weak transcription Muscle Satellite Cultured Cells --
36 chr12:51503200-51560200 Weak transcription Right Ventricle heart
37 chr12:51503600-51532000 Weak transcription Brain Angular Gyrus brain
38 chr12:51504400-51512400 Weak transcription Placenta Amnion Placenta Amnion
39 chr12:51504400-51518200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr12:51504400-51518400 Weak transcription Ovary ovary
41 chr12:51504800-51518200 Weak transcription Gastric stomach
42 chr12:51504800-51518600 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr12:51504800-51518600 Weak transcription Brain Substantia Nigra brain
44 chr12:51504800-51518800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr12:51504800-51563400 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr12:51505200-51518200 Weak transcription Lung lung
47 chr12:51505800-51513200 Strong transcription Primary B cells from cord blood blood
48 chr12:51506000-51512800 Strong transcription HUES48 Cell Line embryonic stem cell
49 chr12:51506000-51513200 Strong transcription Dnd41 blood
50 chr12:51506200-51513200 Strong transcription Adipose Nuclei Adipose

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