| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv933805 |
chr5:1450724-1941619 |
Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
96 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv880740 |
chr5:1468287-1671200 |
Weak transcription Strong transcription Active TSS Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv881554 |
chr5:1468287-1696932 |
Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv817407 |
chr5:1495354-2191460 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
107 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv881096 |
chr5:1503610-1671200 |
Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
48 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv880390 |
chr5:1612612-1653418 |
Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv880788 |
chr5:1629407-1671200 |
Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv881328 |
chr5:1637461-1671200 |
Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv596886 |
chr5:1644651-1655800 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv433369 |
chr5:1644735-1656054 |
Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv329999 |
chr5:1648229-1648701 |
Bivalent Enhancer Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
