Variant report

Variant rs559552995
Chromosome Location chr22:23522090-23522091
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23517800-23522200 Enhancers GM12878-XiMat blood
2 chr22:23518000-23522200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr22:23519200-23522200 Enhancers Primary B cells from peripheral blood blood
4 chr22:23519400-23522200 Enhancers Primary neutrophils fromperipheralblood blood
5 chr22:23519600-23522200 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr22:23519800-23522200 Enhancers Primary B cells from cord blood blood
7 chr22:23520600-23522200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr22:23520600-23522200 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr22:23520600-23522200 Bivalent Enhancer Fetal Muscle Leg muscle
10 chr22:23520600-23522200 Enhancers Fetal Thymus thymus
11 chr22:23520600-23522400 Flanking Active TSS Stomach Smooth Muscle stomach
12 chr22:23520800-23522200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr22:23520800-23522200 Enhancers HUES64 Cell Line embryonic stem cell
14 chr22:23520800-23522200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr22:23520800-23522200 Enhancers Fetal Intestine Small intestine
16 chr22:23520800-23522200 Enhancers Fetal Kidney kidney
17 chr22:23520800-23522200 Enhancers HUVEC blood vessel
18 chr22:23520800-23522400 Enhancers HUES48 Cell Line embryonic stem cell
19 chr22:23520800-23522400 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr22:23521000-23522200 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr22:23521000-23522200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr22:23521000-23522200 Enhancers Cortex derived primary cultured neurospheres brain
23 chr22:23521000-23522200 Weak transcription Fetal Heart heart
24 chr22:23521000-23522400 Enhancers NH-A brain
25 chr22:23521000-23522600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr22:23521000-23522600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
27 chr22:23521200-23522200 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
28 chr22:23521200-23522400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr22:23521200-23522600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr22:23521400-23522400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr22:23521400-23522400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
32 chr22:23521400-23522600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr22:23521600-23522200 Enhancers Primary T cells from cord blood blood
34 chr22:23521600-23522200 Flanking Active TSS Colon Smooth Muscle Colon
35 chr22:23521600-23522200 Bivalent Enhancer Fetal Stomach stomach
36 chr22:23521600-23522200 Enhancers Lung lung
37 chr22:23521600-23522400 Flanking Active TSS Brain Germinal Matrix brain
38 chr22:23521600-23522600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr22:23521600-23522600 Flanking Active TSS K562 blood
40 chr22:23521800-23522200 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
41 chr22:23521800-23522200 Enhancers Primary monocytes fromperipheralblood blood
42 chr22:23521800-23522200 Enhancers Primary mononuclear cells fromperipheralblood Blood
43 chr22:23521800-23522200 Flanking Active TSS Brain Anterior Caudate brain
44 chr22:23521800-23522200 Enhancers Ovary ovary
45 chr22:23521800-23522200 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
46 chr22:23521800-23522400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
47 chr22:23521800-23522400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr22:23521800-23522400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr22:23521800-23522400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr22:23521800-23522400 Flanking Active TSS Brain Hippocampus Middle brain

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