Variant report

Variant	rs559569100
Chromosome Location	chr8:4941390-4941391
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv609876	chr8:4494811-5092970	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1029480	chr8:4497596-5081032	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv498130	chr8:4532988-5176376	Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1031026	chr8:4771072-5054326	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv889978	chr8:4853197-5460166	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
6	nsv1032611	chr8:4887741-4957559	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv539405	chr8:4887741-4957559	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv1028846	chr8:4907673-5128665	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	nsv465402	chr8:4909163-4961837	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
10	nsv609900	chr8:4909163-4961837	Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv889979	chr8:4915575-4944714	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv1025394	chr8:4939429-5041417	Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
13	nsv889980	chr8:4940320-5112194	Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
14	esv7083	chr8:4941005-4941680	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3478773	chr8:4941106-4941625	Enhancers Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3520406	chr8:4941124-4941605	Active TSS Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3520404	chr8:4941129-4941627	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3520402	chr8:4941149-4941557	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3478776	chr8:4941160-4941593	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv3478777	chr8:4941161-4941555	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
21	esv3520401	chr8:4941168-4941573	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
22	esv3478774	chr8:4941169-4941548	Enhancers Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
23	nsv512026	chr8:4941175-4944233	Enhancers Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
24	esv3520405	chr8:4941179-4941571	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
25	esv3332429	chr8:4941188-4941543	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
26	esv3478772	chr8:4941208-4941528	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
27	esv3520403	chr8:4941223-4941521	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
28	esv3478778	chr8:4941224-4941533	Active TSS Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
29	esv3520407	chr8:4941224-4941533	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
30	nsv397354	chr8:4941236-4941532	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:4940800-4941800	Active TSS	Brain Substantia Nigra	brain
2	chr8:4940800-4942400	Enhancers	Primary hematopoietic stem cells	blood
3	chr8:4941000-4943800	Weak transcription	Brain Angular Gyrus	brain

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