Variant report

Variant	rs559617320
Chromosome Location	chr10:95609027-95609028
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv13320	chr10:95594800-95609228	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
2	esv10835	chr10:95605796-95609228	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers	n/a	n/a	inside rSNPs	n/a
3	esv17869	chr10:95608663-95609228	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95608200-95611400	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:95608400-95610400	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
3	chr10:95608600-95609200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr10:95608600-95609600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
5	chr10:95608600-95610800	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
6	chr10:95608600-95611000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
7	chr10:95608800-95609400	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
8	chr10:95608800-95609400	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr10:95608800-95610600	Enhancers	Fetal Lung	lung
10	chr10:95609000-95609200	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
11	chr10:95609000-95609200	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr10:95609000-95609400	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
13	chr10:95609000-95609600	Bivalent Enhancer	H9 Cell Line	embryonic stem cell
14	chr10:95609000-95609800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
15	chr10:95609000-95611000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links