Variant report

Variant	rs559666268
Chromosome Location	chr6:146059136-146059137
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000118496	Chromatin interaction
ENSG00000235652	Chromatin interaction
ENSG00000112425	Chromatin interaction
ENSG00000270638	Chromatin interaction
ENSG00000270828	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv970354	chr6:146057495-146060252	Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:146057200-146063200	Weak transcription	Lung	lung
2	chr6:146058200-146067600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr6:146058400-146059200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:146058400-146063000	Weak transcription	Thymus	Thymus
5	chr6:146058400-146064600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:146058400-146065200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr6:146058600-146070600	Weak transcription	Primary hematopoietic stem cells	blood
8	chr6:146058800-146059200	Enhancers	Colon Smooth Muscle	Colon

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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