| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1013008 |
chr1:78463173-78958701 |
Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
72 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv535012 |
chr1:78463173-78958701 |
Enhancers Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
72 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv871835 |
chr1:78528803-79501129 |
Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
28 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1000388 |
chr1:78638946-78665285 |
Enhancers Weak transcription ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv520237 |
chr1:78639244-78660123 |
Enhancers Weak transcription ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1544 |
chr1:78648491-78660972 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv819341 |
chr1:78649267-78659589 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv546598 |
chr1:78649862-78659621 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv546599 |
chr1:78649862-78660123 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv546600 |
chr1:78649862-78666990 |
Active TSS Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv546604 |
chr1:78650021-78659621 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv546605 |
chr1:78650021-78660123 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
nsv546611 |
chr1:78650249-78659621 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page:
1
