Variant report

Variant rs559700701
Chromosome Location chr17:45330176-45330177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:45314200-45330200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr17:45318600-45330600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr17:45318600-45331200 Weak transcription HSMMtube muscle
4 chr17:45323000-45330600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr17:45326800-45330800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr17:45328200-45330400 Weak transcription Adipose Nuclei Adipose
7 chr17:45328600-45330200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr17:45328600-45330200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr17:45328600-45330600 Enhancers Fetal Intestine Small intestine
10 chr17:45328600-45330600 Enhancers K562 blood
11 chr17:45328600-45330800 Enhancers Rectal Mucosa Donor 31 rectum
12 chr17:45328800-45332200 Enhancers Fetal Heart heart
13 chr17:45329000-45330800 Enhancers Fetal Intestine Large intestine
14 chr17:45329400-45330200 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
15 chr17:45329400-45330200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
16 chr17:45329400-45330400 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
17 chr17:45329400-45330400 Flanking Active TSS HepG2 liver
18 chr17:45329400-45330600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr17:45329400-45330800 Enhancers Placenta Placenta
20 chr17:45329400-45331200 Enhancers Liver Liver
21 chr17:45329600-45330200 Enhancers Left Ventricle heart
22 chr17:45329600-45330400 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
23 chr17:45329600-45330600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
24 chr17:45329600-45330600 Enhancers NHDF-Ad bronchial
25 chr17:45329600-45330800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr17:45329600-45330800 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr17:45329600-45330800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr17:45329600-45330800 Enhancers Aorta Aorta
29 chr17:45329600-45330800 Enhancers Right Ventricle heart
30 chr17:45329800-45330600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr17:45329800-45330800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
32 chr17:45329800-45330800 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
33 chr17:45329800-45330800 Enhancers Duodenum Mucosa Duodenum
34 chr17:45329800-45330800 Weak transcription Ovary ovary
35 chr17:45329800-45330800 Weak transcription Right Atrium heart
36 chr17:45329800-45330800 Enhancers Hela-S3 cervix

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