Variant report

Variant rs559752131
Chromosome Location chr3:50193729-50193730
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50191800-50194400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:50192000-50193800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
3 chr3:50192000-50194400 Active TSS Pancreatic Islets Pancreatic Islet
4 chr3:50192000-50194400 Active TSS Psoas Muscle Psoas
5 chr3:50192000-50194800 Active TSS H9 Cell Line embryonic stem cell
6 chr3:50192000-50194800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:50192000-50194800 Active TSS Gastric stomach
8 chr3:50192000-50194800 Active TSS Left Ventricle heart
9 chr3:50192000-50194800 Active TSS Right Atrium heart
10 chr3:50192200-50193800 Active TSS Ovary ovary
11 chr3:50192200-50194000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr3:50192200-50194400 Active TSS HMEC breast
13 chr3:50192200-50195000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr3:50192400-50194400 Active TSS NHEK skin
15 chr3:50192400-50194600 Active TSS ES-WA7 Cell Line embryonic stem cell
16 chr3:50192400-50195000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr3:50192600-50194600 Bivalent/Poised TSS Brain Hippocampus Middle brain
18 chr3:50192600-50194800 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
19 chr3:50192600-50194800 Active TSS Fetal Kidney kidney
20 chr3:50193000-50193800 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
21 chr3:50193000-50193800 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
22 chr3:50193000-50193800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
23 chr3:50193000-50193800 Flanking Active TSS Right Ventricle heart
24 chr3:50193000-50193800 Flanking Active TSS NH-A brain
25 chr3:50193000-50194000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
26 chr3:50193000-50194000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr3:50193000-50194200 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
28 chr3:50193000-50194200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
29 chr3:50193000-50194400 Bivalent Enhancer Primary B cells from peripheral blood blood
30 chr3:50193000-50194400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
31 chr3:50193000-50194400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr3:50193000-50194600 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
33 chr3:50193000-50194800 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
34 chr3:50193000-50194800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
35 chr3:50193000-50194800 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
36 chr3:50193000-50194800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
37 chr3:50193000-50194800 Flanking Bivalent TSS/Enh Fetal Stomach stomach
38 chr3:50193000-50194800 Flanking Bivalent TSS/Enh Fetal Thymus thymus
39 chr3:50193000-50195000 Flanking Bivalent TSS/Enh Placenta Placenta
40 chr3:50193200-50193800 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
41 chr3:50193200-50193800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr3:50193200-50193800 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
43 chr3:50193200-50194000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
44 chr3:50193200-50194200 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
45 chr3:50193200-50194200 Bivalent/Poised TSS Thymus Thymus
46 chr3:50193200-50194400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
47 chr3:50193200-50194600 Bivalent Enhancer Primary T cells fromperipheralblood blood
48 chr3:50193200-50194600 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
49 chr3:50193200-50194600 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
50 chr3:50193200-50194800 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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