Variant report
| Variant | rs55977643 |
|---|---|
| Chromosome Location | chr6:144631603-144631604 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:144609200-144641600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 2 | chr6:144616400-144648000 | Weak transcription | NHEK | skin |
| 3 | chr6:144617200-144636400 | Weak transcription | A549 | lung |
| 4 | chr6:144617400-144632800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 5 | chr6:144619200-144634600 | Weak transcription | Colon Smooth Muscle | Colon |
| 6 | chr6:144619800-144631800 | Weak transcription | Fetal Heart | heart |
| 7 | chr6:144619800-144634600 | Weak transcription | Brain Hippocampus Middle | brain |
| 8 | chr6:144622400-144637000 | Genic enhancers | HepG2 | liver |
| 9 | chr6:144624200-144632000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 10 | chr6:144624200-144641400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 11 | chr6:144624200-144641600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr6:144624400-144648000 | Weak transcription | HMEC | breast |
| 13 | chr6:144625800-144632600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 14 | chr6:144627000-144634600 | Weak transcription | Small Intestine | intestine |
| 15 | chr6:144627400-144634600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 16 | chr6:144627400-144641800 | Weak transcription | Thymus | Thymus |
| 17 | chr6:144627600-144631800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 18 | chr6:144627600-144631800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 19 | chr6:144627600-144631800 | Weak transcription | Pancreas | Pancrea |
| 20 | chr6:144627600-144631800 | Weak transcription | Psoas Muscle | Psoas |
| 21 | chr6:144627600-144634200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 22 | chr6:144627600-144634200 | Weak transcription | Right Atrium | heart |
| 23 | chr6:144627600-144634600 | Weak transcription | Aorta | Aorta |
| 24 | chr6:144627600-144634600 | Weak transcription | Esophagus | oesophagus |
| 25 | chr6:144627600-144634600 | Weak transcription | Spleen | Spleen |
| 26 | chr6:144627600-144636400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 27 | chr6:144627600-144643400 | Weak transcription | NH-A | brain |
| 28 | chr6:144627600-144645800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 29 | chr6:144627800-144631800 | Weak transcription | GM12878-XiMat | blood |
| 30 | chr6:144627800-144632200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 31 | chr6:144627800-144634600 | Weak transcription | Fetal Thymus | thymus |
| 32 | chr6:144628600-144631800 | Strong transcription | Fetal Muscle Leg | muscle |
| 33 | chr6:144629000-144632800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 34 | chr6:144629000-144633000 | Strong transcription | HSMM | muscle |
| 35 | chr6:144629200-144634400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 36 | chr6:144629200-144634400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 37 | chr6:144629200-144635200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 38 | chr6:144629400-144632000 | Strong transcription | Fetal Intestine Small | intestine |
| 39 | chr6:144629400-144632600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 40 | chr6:144629400-144632600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 41 | chr6:144629400-144633000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 42 | chr6:144629400-144641800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 43 | chr6:144629600-144632400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 44 | chr6:144630000-144632400 | Weak transcription | Primary B cells from cord blood | blood |
| 45 | chr6:144630200-144648400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 46 | chr6:144630400-144634000 | Weak transcription | Right Ventricle | heart |
| 47 | chr6:144630400-144634600 | Weak transcription | Gastric | stomach |
| 48 | chr6:144630600-144631800 | Weak transcription | Ovary | ovary |
| 49 | chr6:144630600-144632600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 50 | chr6:144630600-144634200 | Weak transcription | NHDF-Ad | bronchial |
