Variant report

Variant	rs55981208
Chromosome Location	chr9:110739414-110739415
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:110736949..110739426-chr9:110801210..110803614,2	MCF-7	breast:
2	chr9:110731325..110732937-chr9:110737634..110740327,2	K562	blood:

Variant related genes	Relation type
ENSG00000213557	Chromatin interaction

rs_ID	r²[population]
rs10979150	0.83[AFR][1000 genomes]
rs10979153	0.82[AFR][1000 genomes]
rs12341320	0.96[AFR][1000 genomes]
rs12348134	0.82[AFR][1000 genomes]
rs28533096	1.00[AFR][1000 genomes]
rs55759748	1.00[AFR][1000 genomes]
rs73653697	0.96[AFR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110736000-110740000	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr9:110736800-110739600	Enhancers	Rectal Mucosa Donor 29	rectum
3	chr9:110737400-110739600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr9:110737800-110739600	Enhancers	Duodenum Mucosa	Duodenum
5	chr9:110737800-110740000	Enhancers	Stomach Mucosa	stomach
6	chr9:110738200-110740000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr9:110738200-110740000	Enhancers	Sigmoid Colon	Sigmoid Colon
8	chr9:110738800-110740000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr9:110738800-110740000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
10	chr9:110739000-110739600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr9:110739000-110739600	Enhancers	Fetal Stomach	stomach
12	chr9:110739000-110739600	Enhancers	Hela-S3	cervix
13	chr9:110739000-110739600	Enhancers	HSMMtube	muscle
14	chr9:110739000-110739600	Enhancers	NHDF-Ad	bronchial
15	chr9:110739000-110739800	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr9:110739000-110740000	Enhancers	Right Atrium	heart
17	chr9:110739200-110739600	Enhancers	iPS-15b Cell Line	embryonic stem cell
18	chr9:110739200-110740000	Enhancers	H9 Cell Line	embryonic stem cell
19	chr9:110739400-110739800	Enhancers	Primary B cells from cord blood	blood
20	chr9:110739400-110740000	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr9:110739400-110740200	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr9:110739400-110741600	Weak transcription	Primary neutrophils fromperipheralblood	blood
23	chr9:110739400-110744200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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