Variant report

Variant	rs55982087
Chromosome Location	chr1:145293014-145293015
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:52)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:52 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZBTB33	chr1:145292730-145293790	GM12878	blood:	n/a	n/a
2	RXRA	chr1:145292758-145293678	HepG2	liver:	n/a	n/a
3	PAX5	chr1:145292744-145293652	GM12878	blood:	n/a	n/a
4	FOXA1	chr1:145292781-145293768	HepG2	liver:	n/a	n/a
5	CTCF	chr1:145293000-145293150	GM12873	blood:	n/a	n/a
6	EBF1	chr1:145292718-145293081	GM12878	blood:	n/a	n/a
7	RAD21	chr1:145292903-145293807	SK-N-SH	brain:	n/a	n/a
8	JUND	chr1:145292708-145293651	HepG2	liver:	n/a	n/a
9	SP1	chr1:145292740-145293705	HepG2	liver:	n/a	n/a
10	SMC3	chr1:145291481-145293950	SK-N-SH	brain:	n/a	n/a
11	IRF4	chr1:145292710-145293696	GM12878	blood:	n/a	n/a
12	IRF4	chr1:145292654-145293822	GM12878	blood:	n/a	n/a
13	CTCF	chr1:145292735-145293790	A549	lung:	n/a	n/a
14	CTCF	chr1:145292901-145293702	K562	blood:	n/a	n/a
15	CTCF	chr1:145293000-145293150	AG04450	lung:	n/a	n/a
16	SIX5	chr1:145292709-145293662	K562	blood:	n/a	chr1:145293613-145293629 chr1:145293613-145293629 chr1:145293613-145293629 chr1:145293613-145293629
17	POU2F2	chr1:145292656-145293816	GM12878	blood:	n/a	n/a
18	SIX5	chr1:145292664-145293289	K562	blood:	n/a	n/a
19	PBX3	chr1:145292826-145293036	GM12878	blood:	n/a	n/a
20	POLR2A	chr1:145292858-145293615	PANC-1	pancreas:	n/a	n/a
21	SP1	chr1:145292749-145293718	GM12878	blood:	n/a	n/a
22	POLR2A	chr1:145292811-145293248	H1-hESC	embryonic stem cell:	n/a	n/a
23	USF1	chr1:145292760-145293252	HepG2	liver:	n/a	n/a
24	CTCF	chr1:145292666-145293709	A549	lung:	n/a	n/a
25	CTCF	chr1:145293000-145293150	HMEC	breast:	n/a	n/a
26	RXRA	chr1:145292909-145293686	GM12878	blood:	n/a	n/a
27	POLR2A	chr1:145292695-145293692	GM12878	blood:	n/a	n/a
28	SP1	chr1:145292741-145293768	GM12878	blood:	n/a	n/a
29	ZBTB33	chr1:145292742-145293671	K562	blood:	n/a	n/a
30	POLR2A	chr1:145292664-145293668	Hela-S3	cervix:	n/a	n/a
31	PAX5	chr1:145292809-145293667	GM12878	blood:	n/a	n/a
32	CTCF	chr1:145293000-145293150	GM12864	blood:	n/a	n/a
33	POLR2A	chr1:145292549-145293731	H1-hESC	embryonic stem cell:	n/a	n/a
34	CTCF	chr1:145292912-145293813	A549	lung:	n/a	n/a
35	POLR2A	chr1:145292879-145293589	SK-N-MC	brain:	n/a	n/a
36	EBF1	chr1:145292883-145293630	GM12878	blood:	n/a	n/a
37	GABPA	chr1:145292706-145293311	Hela-S3	cervix:	n/a	n/a
38	FOSL2	chr1:145292704-145293698	HepG2	liver:	n/a	n/a
39	CTCF	chr1:145293000-145293150	GM12878	blood:	n/a	n/a
40	GATA2	chr1:145292656-145293754	K562	blood:	n/a	n/a
41	TCF12	chr1:145292984-145293268	GM12878	blood:	n/a	n/a
42	EP300	chr1:145292790-145293040	GM12878	blood:	n/a	n/a
43	FOSL2	chr1:145292701-145293691	HepG2	liver:	n/a	n/a
44	BCL11A	chr1:145292839-145293229	GM12878	blood:	n/a	n/a
45	ZBTB33	chr1:145292767-145293249	HepG2	liver:	n/a	n/a
46	ZBTB33	chr1:145292748-145293673	GM12878	blood:	n/a	n/a
47	RXRA	chr1:145292713-145293802	HepG2	liver:	n/a	n/a
48	CTCF	chr1:145293000-145293150	HBMEC	blood vessel:	n/a	n/a
49	EP300	chr1:145292661-145293761	GM12878	blood:	n/a	n/a
50	CTCF	chr1:145293000-145293150	GM12865	blood:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:145288943..145293306-chr1:149221737..149224658,6	MCF-7	breast:
2	chr1:145208945..145211572-chr1:145290799..145293780,3	MCF-7	breast:
3	chr1:145291510..145293949-chr1:149222418..149224230,2	K562	blood:

No data

Variant related genes	Relation type
NBPF10	TF binding region
ENSG00000206737	Chromatin interaction
ENSG00000213240	Chromatin interaction
ENSG00000255168	Chromatin interaction

Extended variants
information (count: 57 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:57 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1830469	chr1:144679113-145320996	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
2	nsv1005055	chr1:144893406-145792052	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	381 gene(s)	inside rSNPs	diseases
3	esv1822839	chr1:144902232-145393578	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
4	esv1826561	chr1:144902232-145393578	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
5	esv1849727	chr1:144902232-145393578	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
6	nsv1003688	chr1:144949963-145398179	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	257 gene(s)	inside rSNPs	diseases
7	nsv432720	chr1:144956393-145727683	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
8	esv2761299	chr1:144957688-145366695	Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
9	nsv998771	chr1:144986365-145687024	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	362 gene(s)	inside rSNPs	diseases
10	nsv535079	chr1:144986365-145687024	Weak transcription Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	362 gene(s)	inside rSNPs	diseases
11	nsv933296	chr1:144994945-145740657	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	359 gene(s)	inside rSNPs	diseases
12	nsv1002736	chr1:145023783-145372551	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
13	nsv427752	chr1:145057218-145483353	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	307 gene(s)	inside rSNPs	diseases
14	nsv1000082	chr1:145081821-145687024	Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	347 gene(s)	inside rSNPs	diseases
15	nsv535081	chr1:145081821-145687024	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	347 gene(s)	inside rSNPs	diseases
16	esv1824820	chr1:145086810-145393578	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	233 gene(s)	inside rSNPs	diseases
17	nsv998789	chr1:145100386-145406787	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	226 gene(s)	inside rSNPs	diseases
18	esv3380232	chr1:145142595-145295993	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
19	nsv998819	chr1:145158409-145372551	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
20	nsv1013638	chr1:145172973-146012524	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	339 gene(s)	inside rSNPs	diseases
21	esv1828621	chr1:145176656-145393578	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	215 gene(s)	inside rSNPs	diseases
22	nsv869813	chr1:145181865-145382362	Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	96 gene(s)	inside rSNPs	diseases
23	esv1818207	chr1:145183296-145370031	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
24	esv3350338	chr1:145185595-145370693	Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
25	esv3390875	chr1:145185995-145299693	Weak transcription Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
26	esv16491	chr1:145188847-145379294	Bivalent Enhancer Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
27	nsv824442	chr1:145188847-145382690	Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	187 gene(s)	inside rSNPs	diseases
28	nsv8091	chr1:145189119-145372647	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
29	nsv831337	chr1:145189320-145393470	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	215 gene(s)	inside rSNPs	diseases
30	esv1824631	chr1:145190160-145370031	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
31	esv1818332	chr1:145191306-145301954	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
32	esv1832915	chr1:145191306-145369179	Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
33	esv1824183	chr1:145191818-145302154	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
34	esv1823199	chr1:145192018-145369179	Strong transcription ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
35	esv1850672	chr1:145192018-145384023	Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Enhancers Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	213 gene(s)	inside rSNPs	diseases
36	esv1812607	chr1:145195689-145368848	Strong transcription ZNF genes & repeats Active TSS Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
37	esv1846276	chr1:145197749-145384335	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	213 gene(s)	inside rSNPs	diseases
38	esv1816073	chr1:145197749-145388977	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	215 gene(s)	inside rSNPs	diseases
39	esv1829665	chr1:145202616-145368588	Bivalent Enhancer Weak transcription Genic enhancers Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
40	esv1846460	chr1:145205845-145303090	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
41	esv1849891	chr1:145205845-145366481	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
42	nsv831348	chr1:145210345-145308825	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
43	esv1833229	chr1:145211543-145369013	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
44	esv1843448	chr1:145212590-145302482	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
45	esv1829997	chr1:145212590-145369179	Weak transcription Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
46	esv1803011	chr1:145214080-145368848	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
47	esv2422428	chr1:145259792-145609308	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	308 gene(s)	inside rSNPs	diseases
48	nsv2677	chr1:145260675-145392668	ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	211 gene(s)	inside rSNPs	diseases
49	nsv1002731	chr1:145276259-145792052	Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	327 gene(s)	inside rSNPs	diseases
50	esv2762190	chr1:145276271-145311536	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145277600-145293800	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr1:145277600-145305400	Weak transcription	HepG2	liver
3	chr1:145277800-145296400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr1:145277800-145323400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr1:145281600-145296400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr1:145281800-145297800	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr1:145281800-145298600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr1:145282000-145325400	Weak transcription	Fetal Brain Female	brain
9	chr1:145282400-145293200	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr1:145283000-145318600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr1:145283400-145298600	Weak transcription	A549	lung
12	chr1:145283800-145293600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr1:145283800-145293800	Weak transcription	HUVEC	blood vessel
14	chr1:145283800-145311200	Weak transcription	Stomach Mucosa	stomach
15	chr1:145286800-145304000	Weak transcription	K562	blood
16	chr1:145289000-145294000	Genic enhancers	Primary T helper naive cells from peripheral blood	blood
17	chr1:145289600-145295000	Strong transcription	Monocytes-CD14+_RO01746	blood
18	chr1:145289600-145300200	Weak transcription	Fetal Brain Male	brain
19	chr1:145289800-145294800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr1:145289800-145294800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr1:145290000-145294600	Strong transcription	Stomach Smooth Muscle	stomach
22	chr1:145290000-145298800	Strong transcription	Primary monocytes fromperipheralblood	blood
23	chr1:145290200-145293200	Strong transcription	Rectal Mucosa Donor 29	rectum
24	chr1:145290200-145295000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr1:145290400-145294800	Strong transcription	NHEK	skin
26	chr1:145290600-145293200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr1:145290600-145296400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr1:145290800-145293200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr1:145290800-145293200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr1:145290800-145293200	Strong transcription	Muscle Satellite Cultured Cells	--
31	chr1:145290800-145293200	Weak transcription	Right Atrium	heart
32	chr1:145290800-145294800	Strong transcription	Cortex derived primary cultured neurospheres	brain
33	chr1:145290800-145294800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr1:145290800-145296200	Weak transcription	Brain Hippocampus Middle	brain
35	chr1:145290800-145298200	Strong transcription	Osteobl	bone
36	chr1:145290800-145303800	Weak transcription	H9 Cell Line	embryonic stem cell
37	chr1:145290800-145313800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr1:145290800-145323400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr1:145290800-145328000	Weak transcription	Small Intestine	intestine
40	chr1:145291000-145293200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr1:145291000-145293200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
42	chr1:145291000-145293200	Weak transcription	Brain Cingulate Gyrus	brain
43	chr1:145291000-145294000	Strong transcription	Primary B cells from cord blood	blood
44	chr1:145291000-145294400	Strong transcription	Sigmoid Colon	Sigmoid Colon
45	chr1:145291000-145294400	Strong transcription	HSMM	muscle
46	chr1:145291000-145294600	Strong transcription	HSMMtube	muscle
47	chr1:145291000-145294800	Strong transcription	Primary B cells from peripheral blood	blood
48	chr1:145291000-145295000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr1:145291000-145296200	Weak transcription	Right Ventricle	heart
50	chr1:145291000-145296600	Weak transcription	Skeletal Muscle Male	skeletal muscle

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