Variant report

Variant rs55983707
Chromosome Location chr21:46896770-46896771
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46882800-46899000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr21:46891200-46897800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr21:46891600-46896800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr21:46891600-46897400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr21:46891600-46899800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr21:46891800-46896800 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr21:46891800-46897200 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr21:46891800-46897800 Weak transcription Rectal Smooth Muscle rectum
9 chr21:46891800-46897800 Weak transcription Right Atrium heart
10 chr21:46891800-46898200 Weak transcription Colon Smooth Muscle Colon
11 chr21:46891800-46906400 Strong transcription HUES6 Cell Line embryonic stem cell
12 chr21:46892000-46897400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr21:46892000-46897800 Weak transcription Placenta Amnion Placenta Amnion
14 chr21:46892000-46898000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr21:46892000-46898200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr21:46892000-46898200 Weak transcription Osteobl bone
17 chr21:46892000-46898800 Weak transcription NHDF-Ad bronchial
18 chr21:46892000-46904000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr21:46892200-46897800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr21:46892200-46898000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr21:46892200-46898000 Weak transcription Muscle Satellite Cultured Cells --
22 chr21:46892200-46898800 Weak transcription HSMM muscle
23 chr21:46892400-46907400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr21:46892600-46898000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr21:46892600-46899000 Weak transcription HMEC breast
26 chr21:46892600-46907000 Strong transcription H1 Cell Line embryonic stem cell
27 chr21:46892800-46897800 Weak transcription Colonic Mucosa Colon
28 chr21:46892800-46898000 Weak transcription NH-A brain
29 chr21:46892800-46900000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr21:46892800-46908600 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr21:46893000-46897200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr21:46893000-46897400 Weak transcription Brain Angular Gyrus brain
33 chr21:46893000-46897800 Weak transcription Duodenum Mucosa Duodenum
34 chr21:46893000-46898000 Weak transcription Brain Inferior Temporal Lobe brain
35 chr21:46893000-46909400 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr21:46893000-46911200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr21:46893200-46897400 Weak transcription Fetal Heart heart
38 chr21:46893200-46897400 Strong transcription Fetal Muscle Leg muscle
39 chr21:46893200-46897800 Weak transcription Brain Anterior Caudate brain
40 chr21:46893200-46897800 Weak transcription Brain Hippocampus Middle brain
41 chr21:46893200-46897800 Weak transcription Brain Substantia Nigra brain
42 chr21:46893200-46897800 Weak transcription Fetal Intestine Small intestine
43 chr21:46893400-46898000 Weak transcription Brain Cingulate Gyrus brain
44 chr21:46893600-46904800 Strong transcription A549 lung
45 chr21:46893600-46907600 Strong transcription iPS-15b Cell Line embryonic stem cell
46 chr21:46893800-46897200 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr21:46894000-46897800 Strong transcription Liver Liver
48 chr21:46894000-46904800 Strong transcription iPS-18 Cell Line embryonic stem cell
49 chr21:46894000-46905000 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr21:46894200-46897400 Strong transcription Fetal Stomach stomach

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