The 2.0 version of rSNPBase

Variant report

Variant rs55990625
Chromosome Location chr4:736485-736486
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:702200-754800 Weak transcription Hela-S3 cervix
2 chr4:715600-750200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr4:720000-738400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:720800-738400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr4:721000-738600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:721000-743600 Weak transcription Right Atrium heart
7 chr4:723600-738600 Strong transcription Brain Germinal Matrix brain
8 chr4:723800-737600 Strong transcription Dnd41 blood
9 chr4:723800-738400 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr4:724200-738600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr4:724200-738600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr4:724600-736600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr4:725200-738400 Strong transcription Thymus Thymus
14 chr4:725200-738600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr4:725200-738600 Strong transcription Fetal Stomach stomach
16 chr4:725800-738400 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr4:725800-738600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr4:726200-738400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr4:726200-738400 Strong transcription Placenta Amnion Placenta Amnion
20 chr4:726200-738600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr4:727000-767600 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr4:727200-738200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr4:728000-741800 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr4:728600-755800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr4:728600-763400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr4:729000-742400 Weak transcription Small Intestine intestine
27 chr4:729000-754600 Weak transcription Fetal Kidney kidney
28 chr4:729000-762600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr4:729600-753800 Weak transcription Psoas Muscle Psoas
30 chr4:729600-760800 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr4:729800-738400 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr4:729800-741600 Weak transcription Rectal Smooth Muscle rectum
33 chr4:732000-737400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr4:732000-742400 Weak transcription NHDF-Ad bronchial
35 chr4:732000-745200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr4:732200-741800 Weak transcription K562 blood
37 chr4:732200-743600 Weak transcription HMEC breast
38 chr4:733400-738400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr4:733600-737200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr4:733600-738400 Strong transcription Fetal Intestine Small intestine
41 chr4:733600-741600 Weak transcription Brain Angular Gyrus brain
42 chr4:733600-741600 Weak transcription GM12878-XiMat blood
43 chr4:733600-742600 Weak transcription Stomach Mucosa stomach
44 chr4:733600-753800 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr4:733800-747400 Weak transcription Primary B cells from cord blood blood
46 chr4:734000-741600 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr4:734000-744000 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr4:734000-745400 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr4:734200-736600 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr4:734200-741800 Weak transcription Colon Smooth Muscle Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015