Variant report

Variant	rs559920677
Chromosome Location	chr9:102057953-102057954
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893620	chr9:102029791-102194921	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv3325144	chr9:102057764-102058055	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102054400-102058400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr9:102057400-102058600	Enhancers	Primary B cells from peripheral blood	blood
3	chr9:102057400-102058800	Enhancers	K562	blood
4	chr9:102057600-102058400	Enhancers	Fetal Kidney	kidney
5	chr9:102057600-102058400	Enhancers	Fetal Stomach	stomach
6	chr9:102057600-102058600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr9:102057600-102059600	Enhancers	Fetal Thymus	thymus
8	chr9:102057600-102060800	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr9:102057800-102058600	Enhancers	Fetal Brain Female	brain
10	chr9:102057800-102059000	Weak transcription	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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