Variant report

Variant rs55992496
Chromosome Location chr2:33201637-33201638
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33193200-33201800 Weak transcription Stomach Smooth Muscle stomach
2 chr2:33193600-33201800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:33196600-33201800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:33200400-33201800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr2:33201000-33202000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
6 chr2:33201200-33201800 Enhancers Rectal Mucosa Donor 29 rectum
7 chr2:33201200-33202000 Enhancers Colonic Mucosa Colon
8 chr2:33201200-33202800 Enhancers Right Atrium heart
9 chr2:33201200-33203000 Enhancers Fetal Heart heart
10 chr2:33201200-33203000 Enhancers Gastric stomach
11 chr2:33201200-33203000 Enhancers Left Ventricle heart
12 chr2:33201200-33203000 Enhancers Right Ventricle heart
13 chr2:33201400-33201800 Enhancers Rectal Mucosa Donor 31 rectum
14 chr2:33201400-33201800 Enhancers A549 lung
15 chr2:33201400-33202200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:33201400-33202400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr2:33201400-33202800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
18 chr2:33201400-33202800 Enhancers Liver Liver
19 chr2:33201400-33203000 Enhancers Pancreas Pancrea
20 chr2:33201600-33201800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr2:33201600-33201800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr2:33201600-33202000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:33201600-33202200 Flanking Active TSS Stomach Mucosa stomach
24 chr2:33201600-33202800 Enhancers Esophagus oesophagus
25 chr2:33201600-33202800 Enhancers Sigmoid Colon Sigmoid Colon
26 chr2:33201600-33202800 Enhancers Spleen Spleen
27 chr2:33201600-33203000 Enhancers K562 blood
28 chr2:33201600-33203000 Enhancers NHEK skin

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