Variant report

Variant	rs559925026
Chromosome Location	chr2:127412080-127412081
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002265	chr2:127029745-127733458	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv535919	chr2:127029745-127733458	Strong transcription Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv583011	chr2:127386211-127489031	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv875000	chr2:127402833-127423066	Enhancers Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv875001	chr2:127402833-127431312	Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv875002	chr2:127412013-127420211	Active TSS Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:127406400-127412400	Weak transcription	Fetal Muscle Leg	muscle
2	chr2:127408000-127413000	Weak transcription	Aorta	Aorta
3	chr2:127410400-127412600	Enhancers	K562	blood
4	chr2:127410800-127412600	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr2:127410800-127412800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr2:127410800-127414200	Weak transcription	Hela-S3	cervix
7	chr2:127411000-127412400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr2:127411000-127412400	Weak transcription	Left Ventricle	heart
9	chr2:127411000-127412600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr2:127411000-127412800	Weak transcription	Ovary	ovary
11	chr2:127411200-127412400	Weak transcription	Fetal Heart	heart
12	chr2:127411400-127412600	Weak transcription	Primary monocytes fromperipheralblood	blood
13	chr2:127411400-127412600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr2:127411600-127412200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr2:127411600-127412800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr2:127411800-127412200	Weak transcription	Primary T cells from cord blood	blood
17	chr2:127411800-127412400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr2:127411800-127412400	Weak transcription	HUES6 Cell Line	embryonic stem cell
19	chr2:127411800-127412800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr2:127411800-127412800	Enhancers	Fetal Lung	lung
21	chr2:127411800-127413000	Enhancers	Primary hematopoietic stem cells	blood
22	chr2:127412000-127412800	Enhancers	Skeletal Muscle Male	skeletal muscle
23	chr2:127412000-127413000	Enhancers	Fetal Muscle Trunk	muscle

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