Variant report

Variant	rs559955601
Chromosome Location	chr8:102971293-102971294
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:102971042..102973753-chr8:102975673..102978359,2	MCF-7	breast:
2	chr8:102970055..102972345-chr8:102973060..102976868,3	MCF-7	breast:
3	chr8:102968711..102970531-chr8:102970861..102973050,2	MCF-7	breast:
4	chr8:102970883..102973070-chr8:102973117..102975450,3	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018653	chr8:102818271-103009082	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv539700	chr8:102818271-103009082	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv831411	chr8:102937991-103108140	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv972563	chr8:102970051-102975959	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2761453	chr8:102970136-102974682	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102963200-102973600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:102965400-102989800	Weak transcription	Stomach Smooth Muscle	stomach
3	chr8:102967400-102972200	Weak transcription	GM12878-XiMat	blood
4	chr8:102968800-102972200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr8:102968800-102974200	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr8:102969200-102979600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr8:102969800-102971600	Enhancers	NHDF-Ad	bronchial
8	chr8:102969800-102971800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:102970000-102974400	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr8:102970200-102973800	Weak transcription	Ovary	ovary
11	chr8:102970200-102973800	Weak transcription	Rectal Smooth Muscle	rectum
12	chr8:102970200-102973800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr8:102970400-102979600	Weak transcription	Left Ventricle	heart
14	chr8:102970400-102980800	Weak transcription	Psoas Muscle	Psoas
15	chr8:102970800-102971600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr8:102970800-102971600	Enhancers	Placenta Amnion	Placenta Amnion
17	chr8:102970800-102972000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr8:102970800-102979800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr8:102971000-102971800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr8:102971200-102971800	Enhancers	Aorta	Aorta

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