Variant report

Variant rs56003400
Chromosome Location chr1:160112660-160112661
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160088000-160146200 Weak transcription Spleen Spleen
2 chr1:160100000-160114800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:160103400-160118000 Weak transcription Right Atrium heart
4 chr1:160106600-160114200 Weak transcription Adipose Nuclei Adipose
5 chr1:160106800-160121600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:160107000-160112800 Weak transcription Brain Cingulate Gyrus brain
7 chr1:160107400-160114600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:160107600-160121400 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:160108600-160112800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:160108600-160113000 Strong transcription Stomach Smooth Muscle stomach
11 chr1:160109800-160114800 Weak transcription H1 Cell Line embryonic stem cell
12 chr1:160110200-160113000 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr1:160110200-160113400 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:160110200-160114800 Weak transcription Fetal Stomach stomach
15 chr1:160110400-160114400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:160111000-160113400 Enhancers Monocytes-CD14+_RO01746 blood
17 chr1:160111200-160114400 Enhancers Primary monocytes fromperipheralblood blood
18 chr1:160111600-160113000 Strong transcription Skeletal Muscle Male skeletal muscle
19 chr1:160111600-160113200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:160111800-160113000 Genic enhancers Cortex derived primary cultured neurospheres brain
21 chr1:160111800-160113400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:160111800-160114800 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr1:160111800-160117600 Weak transcription Left Ventricle heart
24 chr1:160112000-160113600 Weak transcription Right Ventricle heart
25 chr1:160112000-160115200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr1:160112000-160115200 Weak transcription Fetal Muscle Leg muscle
27 chr1:160112200-160114600 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr1:160112200-160114800 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr1:160112200-160115800 Weak transcription Colon Smooth Muscle Colon
30 chr1:160112200-160118600 Weak transcription Fetal Muscle Trunk muscle
31 chr1:160112200-160119000 Weak transcription HSMMtube muscle
32 chr1:160112200-160119800 Weak transcription Aorta Aorta
33 chr1:160112600-160112800 Genic enhancers Skeletal Muscle Female skeletal muscle
34 chr1:160112600-160114800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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