Variant report

Variant	rs560054274
Chromosome Location	chr8:107511947-107511948
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:107511052..107513324-chr8:107531040..107533004,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533134	chr8:107307812-107670002	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv824701	chr8:107378298-107520063	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2602152	chr8:107510405-107512046	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107503600-107513400	Weak transcription	Spleen	Spleen
2	chr8:107504000-107513400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:107505800-107513400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr8:107509200-107513400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:107509400-107512000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr8:107510800-107512200	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr8:107510800-107512600	Enhancers	Brain Anterior Caudate	brain
8	chr8:107510800-107513800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr8:107510800-107514400	Enhancers	Brain Hippocampus Middle	brain
10	chr8:107511600-107512200	Enhancers	Primary hematopoietic stem cells	blood
11	chr8:107511600-107512200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr8:107511600-107512200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:107511600-107512400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr8:107511600-107512600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr8:107511600-107512600	Enhancers	NH-A	brain
16	chr8:107511600-107513200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr8:107511600-107513200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr8:107511600-107513600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
19	chr8:107511600-107514000	Enhancers	Fetal Kidney	kidney
20	chr8:107511600-107514400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr8:107511600-107514400	Enhancers	NHDF-Ad	bronchial
22	chr8:107511600-107514400	Enhancers	Osteobl	bone
23	chr8:107511600-107514600	Enhancers	Primary hematopoietic stem cells short term culture	blood
24	chr8:107511800-107512000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr8:107511800-107512000	Enhancers	Cortex derived primary cultured neurospheres	brain
26	chr8:107511800-107512000	Enhancers	Brain Angular Gyrus	brain
27	chr8:107511800-107512200	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr8:107511800-107512200	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr8:107511800-107512400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr8:107511800-107512400	Flanking Active TSS	GM12878-XiMat	blood
31	chr8:107511800-107512800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr8:107511800-107514000	Enhancers	HMEC	breast

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