The 2.0 version of rSNPBase

Variant report

Variant rs56009869
Chromosome Location chr18:44452251-44452252
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:44399200-44457000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr18:44407600-44453200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr18:44435000-44457400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr18:44435400-44456000 Weak transcription Fetal Kidney kidney
5 chr18:44437200-44461600 Weak transcription Ovary ovary
6 chr18:44440400-44453400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr18:44440400-44468400 Weak transcription Placenta Amnion Placenta Amnion
8 chr18:44447600-44457400 Weak transcription Fetal Heart heart
9 chr18:44448000-44456400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
10 chr18:44448000-44460600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr18:44449000-44457400 Weak transcription HSMMtube muscle
12 chr18:44449000-44468600 Weak transcription Pancreas Pancrea
13 chr18:44449000-44468600 Weak transcription NHLF lung
14 chr18:44449200-44455200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr18:44449200-44455800 Weak transcription Lung lung
16 chr18:44449200-44456800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr18:44449200-44457200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr18:44449200-44457400 Weak transcription Aorta Aorta
19 chr18:44449200-44457400 Weak transcription Brain Hippocampus Middle brain
20 chr18:44449200-44457400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr18:44449200-44457400 Weak transcription Left Ventricle heart
22 chr18:44449200-44457400 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr18:44449200-44457400 Weak transcription Thymus Thymus
24 chr18:44449200-44458800 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr18:44449400-44453600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr18:44449400-44454200 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr18:44449400-44455400 Weak transcription Primary T cells fromperipheralblood blood
28 chr18:44449400-44455600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr18:44449400-44455600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr18:44449400-44455800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr18:44449400-44457200 Weak transcription Spleen Spleen
32 chr18:44449400-44457400 Weak transcription Colon Smooth Muscle Colon
33 chr18:44449600-44453000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr18:44449600-44453400 Weak transcription HMEC breast
35 chr18:44449600-44454400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr18:44449600-44455600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr18:44449600-44455600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr18:44449600-44455800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr18:44449600-44457000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr18:44449600-44457200 Weak transcription HepG2 liver
41 chr18:44449600-44457600 Weak transcription Right Ventricle heart
42 chr18:44449800-44456400 Weak transcription Primary B cells from peripheral blood blood
43 chr18:44449800-44468400 Weak transcription Stomach Smooth Muscle stomach
44 chr18:44450000-44455000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr18:44450200-44453600 Weak transcription Fetal Muscle Trunk muscle
46 chr18:44450200-44455200 Weak transcription Fetal Intestine Large intestine
47 chr18:44450200-44455400 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr18:44450200-44455600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr18:44450200-44455600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr18:44450200-44455600 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015