Variant report

Variant rs560142559
Chromosome Location chr3:195162589-195162590
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195160200-195162600 Weak transcription Spleen Spleen
2 chr3:195160800-195162600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr3:195161000-195162600 Flanking Active TSS Primary monocytes fromperipheralblood blood
4 chr3:195161000-195162600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr3:195161000-195162800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
6 chr3:195161000-195162800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr3:195161200-195164200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr3:195161200-195164200 Active TSS GM12878-XiMat blood
9 chr3:195161200-195164600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
10 chr3:195161400-195162600 Flanking Active TSS Primary T cells from cord blood blood
11 chr3:195161400-195162600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
12 chr3:195161400-195162600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
13 chr3:195161400-195163000 Flanking Active TSS Primary hematopoietic stem cells blood
14 chr3:195161400-195163200 Flanking Active TSS Primary B cells from cord blood blood
15 chr3:195161400-195164200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr3:195161400-195164200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr3:195161400-195164200 Active TSS K562 blood
18 chr3:195161600-195162800 Flanking Active TSS HUVEC blood vessel
19 chr3:195161600-195164200 Active TSS Muscle Satellite Cultured Cells --
20 chr3:195161800-195162600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
21 chr3:195161800-195162600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr3:195161800-195162600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
23 chr3:195161800-195162600 Flanking Active TSS Dnd41 blood
24 chr3:195161800-195162600 Flanking Active TSS NH-A brain
25 chr3:195161800-195162600 Flanking Active TSS NHEK skin
26 chr3:195161800-195162800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
27 chr3:195161800-195162800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
28 chr3:195161800-195163000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
29 chr3:195161800-195164200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
30 chr3:195161800-195164200 Active TSS Pancreatic Islets Pancreatic Islet
31 chr3:195161800-195164200 Active TSS HMEC breast
32 chr3:195161800-195164400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
33 chr3:195162000-195162600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
34 chr3:195162000-195162600 Flanking Active TSS Primary B cells from peripheral blood blood
35 chr3:195162000-195162600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
36 chr3:195162000-195162600 Flanking Active TSS Brain Germinal Matrix brain
37 chr3:195162000-195162600 Active TSS Fetal Brain Female brain
38 chr3:195162000-195162600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
39 chr3:195162000-195162600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
40 chr3:195162000-195162600 Flanking Active TSS Osteobl bone
41 chr3:195162000-195162800 Flanking Active TSS H1 Cell Line embryonic stem cell
42 chr3:195162000-195162800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
43 chr3:195162000-195162800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
44 chr3:195162000-195162800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
45 chr3:195162000-195162800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
46 chr3:195162000-195162800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr3:195162000-195162800 Flanking Active TSS Fetal Thymus thymus
48 chr3:195162000-195162800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
49 chr3:195162000-195163000 Flanking Active TSS Primary T cells fromperipheralblood blood
50 chr3:195162000-195163600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood

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