Variant report

Variant rs56015123
Chromosome Location chr15:50977228-50977229
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50906400-50977400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr15:50923400-50977600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:50923600-50977600 Weak transcription Brain Substantia Nigra brain
4 chr15:50946800-50977600 Weak transcription Brain Cingulate Gyrus brain
5 chr15:50949000-50977800 Weak transcription Placenta Amnion Placenta Amnion
6 chr15:50950200-50977400 Weak transcription Fetal Lung lung
7 chr15:50950800-50977400 Weak transcription Ovary ovary
8 chr15:50956200-50977400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr15:50957400-50977600 Weak transcription Fetal Intestine Large intestine
10 chr15:50959800-50978000 Weak transcription Esophagus oesophagus
11 chr15:50968200-50977600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr15:50969400-50977600 Weak transcription Fetal Kidney kidney
13 chr15:50970600-50977800 Weak transcription Psoas Muscle Psoas
14 chr15:50973000-50977800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr15:50973200-50977600 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr15:50973400-50977800 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr15:50974800-50977800 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr15:50975000-50977600 Strong transcription Fetal Stomach stomach
19 chr15:50975200-50977800 Enhancers Primary T cells fromperipheralblood blood
20 chr15:50975200-50978000 Enhancers Spleen Spleen
21 chr15:50975400-50977600 Weak transcription H9 Cell Line embryonic stem cell
22 chr15:50975400-50977600 Enhancers Duodenum Mucosa Duodenum
23 chr15:50975400-50977800 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr15:50975800-50977600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr15:50975800-50977600 Enhancers Pancreas Pancrea
26 chr15:50976000-50977600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
27 chr15:50976000-50977600 Enhancers Adipose Nuclei Adipose
28 chr15:50976000-50977600 Genic enhancers Monocytes-CD14+_RO01746 blood
29 chr15:50976000-50977800 Enhancers Colon Smooth Muscle Colon
30 chr15:50976200-50977600 Weak transcription Brain Angular Gyrus brain
31 chr15:50976200-50977800 Enhancers Primary T helper cells fromperipheralblood blood
32 chr15:50976200-50977800 Enhancers Fetal Brain Male brain
33 chr15:50976200-50978000 Enhancers Gastric stomach
34 chr15:50976400-50977400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:50976400-50977400 Genic enhancers Placenta Placenta
36 chr15:50976400-50977800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
37 chr15:50976400-50977800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr15:50976400-50977800 Enhancers Fetal Thymus thymus
39 chr15:50976600-50977400 Enhancers Brain Germinal Matrix brain
40 chr15:50976600-50977400 Enhancers Colonic Mucosa Colon
41 chr15:50976600-50977600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr15:50976600-50977600 Genic enhancers Fetal Intestine Small intestine
43 chr15:50976600-50978000 Enhancers Small Intestine intestine
44 chr15:50976600-50978200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr15:50976600-50978200 Flanking Active TSS Liver Liver
46 chr15:50976800-50977400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr15:50976800-50977400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr15:50976800-50977400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr15:50976800-50977400 Flanking Active TSS Fetal Heart heart
50 chr15:50976800-50977400 Weak transcription Fetal Muscle Trunk muscle

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