Variant report

Variant	rs560157823
Chromosome Location	chr10:94044018-94044019
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975763	chr10:93822289-94105956	Enhancers Bivalent Enhancer Strong transcription Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv1046258	chr10:93866969-94466106	Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
3	esv3410503	chr10:94043665-94044082	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94020200-94049800	Weak transcription	Brain Anterior Caudate	brain
2	chr10:94025800-94049800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr10:94039200-94048800	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr10:94039200-94049600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr10:94039600-94044200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr10:94039600-94044200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr10:94039800-94049600	Weak transcription	Right Atrium	heart
8	chr10:94040000-94048600	Weak transcription	Lung	lung
9	chr10:94040400-94044200	Weak transcription	Psoas Muscle	Psoas
10	chr10:94043000-94044400	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr10:94043200-94049800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr10:94043800-94044200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
13	chr10:94044000-94044200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr10:94044000-94044200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr10:94044000-94044200	Enhancers	Brain Hippocampus Middle	brain
16	chr10:94044000-94044200	Flanking Active TSS	Brain Substantia Nigra	brain
17	chr10:94044000-94044400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr10:94044000-94044400	Active TSS	Adipose Nuclei	Adipose
19	chr10:94044000-94044400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
20	chr10:94044000-94044400	Enhancers	Stomach Mucosa	stomach
21	chr10:94044000-94044400	Enhancers	Stomach Smooth Muscle	stomach
22	chr10:94044000-94044400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
23	chr10:94044000-94044600	Flanking Active TSS	GM12878-XiMat	blood
24	chr10:94044000-94044800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr10:94044000-94044800	Enhancers	Small Intestine	intestine
26	chr10:94044000-94045000	Enhancers	Primary B cells from peripheral blood	blood
27	chr10:94044000-94045000	Enhancers	Duodenum Mucosa	Duodenum

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