The 2.0 version of rSNPBase

Variant report

Variant rs56017357
Chromosome Location chr10:97241128-97241129
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97226400-97242600 Enhancers Fetal Intestine Small intestine
2 chr10:97232000-97242600 Enhancers Fetal Intestine Large intestine
3 chr10:97232400-97242800 Enhancers Liver Liver
4 chr10:97233600-97242000 Enhancers Cortex derived primary cultured neurospheres brain
5 chr10:97233600-97242000 Enhancers Brain Angular Gyrus brain
6 chr10:97233600-97242600 Enhancers Brain Anterior Caudate brain
7 chr10:97233600-97242800 Enhancers Brain Cingulate Gyrus brain
8 chr10:97233600-97242800 Enhancers HSMM muscle
9 chr10:97233800-97241600 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr10:97233800-97241600 Enhancers Fetal Brain Male brain
11 chr10:97234000-97242800 Enhancers Fetal Muscle Leg muscle
12 chr10:97234200-97241600 Enhancers H9 Cell Line embryonic stem cell
13 chr10:97234200-97241800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr10:97234200-97241800 Enhancers HUES6 Cell Line embryonic stem cell
15 chr10:97234400-97242400 Enhancers HSMMtube muscle
16 chr10:97234600-97241200 Enhancers Right Atrium heart
17 chr10:97236600-97241200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr10:97236600-97241600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
19 chr10:97236800-97242800 Enhancers Left Ventricle heart
20 chr10:97237200-97242800 Genic enhancers Breast Myoepithelial Primary Cells Breast
21 chr10:97237200-97243000 Enhancers HepG2 liver
22 chr10:97237200-97254000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr10:97238200-97242600 Weak transcription Small Intestine intestine
24 chr10:97238200-97242800 Enhancers Brain Inferior Temporal Lobe brain
25 chr10:97238400-97242800 Enhancers Brain Hippocampus Middle brain
26 chr10:97238600-97241600 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr10:97238600-97242600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
28 chr10:97238800-97241800 Enhancers Aorta Aorta
29 chr10:97239400-97241400 Enhancers Gastric stomach
30 chr10:97239400-97241400 Enhancers Right Ventricle heart
31 chr10:97239400-97241800 Enhancers HUES48 Cell Line embryonic stem cell
32 chr10:97239600-97241400 Enhancers Brain Substantia Nigra brain
33 chr10:97239600-97241800 Enhancers HUES64 Cell Line embryonic stem cell
34 chr10:97239600-97260800 Weak transcription Brain Germinal Matrix brain
35 chr10:97239800-97241800 Enhancers Rectal Mucosa Donor 29 rectum
36 chr10:97239800-97242000 Enhancers Lung lung
37 chr10:97239800-97242200 Enhancers Stomach Mucosa stomach
38 chr10:97239800-97242600 Enhancers Psoas Muscle Psoas
39 chr10:97240000-97241400 Enhancers H1 Cell Line embryonic stem cell
40 chr10:97240200-97241200 Enhancers Sigmoid Colon Sigmoid Colon
41 chr10:97240200-97241400 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr10:97240200-97242400 Enhancers Pancreatic Islets Pancreatic Islet
43 chr10:97240400-97241400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr10:97240400-97241600 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr10:97240400-97241600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
46 chr10:97240400-97241600 Enhancers Adipose Nuclei Adipose
47 chr10:97240400-97242200 Flanking Active TSS Stomach Smooth Muscle stomach
48 chr10:97240600-97242000 Enhancers Duodenum Smooth Muscle Duodenum
49 chr10:97240600-97242400 Enhancers Colon Smooth Muscle Colon
50 chr10:97240600-97242600 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015