Variant report

Variant	rs560179470
Chromosome Location	chr6:161354217-161354218
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830853	chr6:161180005-161376481	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv2422347	chr6:161211171-161442377	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv3392270	chr6:161353362-161357560	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:161352600-161355200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:161352600-161355400	Weak transcription	Esophagus	oesophagus
3	chr6:161352600-161355400	Weak transcription	Lung	lung
4	chr6:161352800-161355400	Weak transcription	Pancreas	Pancrea
5	chr6:161352800-161355600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:161352800-161357200	Weak transcription	Fetal Brain Male	brain
7	chr6:161353000-161355400	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr6:161354000-161355000	Enhancers	K562	blood
9	chr6:161354200-161354400	Enhancers	H1 Cell Line	embryonic stem cell
10	chr6:161354200-161354400	Enhancers	Brain Inferior Temporal Lobe	brain
11	chr6:161354200-161354600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr6:161354200-161354600	Enhancers	Fetal Heart	heart
13	chr6:161354200-161354800	Enhancers	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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