Variant report
| Variant | rs56028731 |
|---|---|
| Chromosome Location | chr3:111455602-111455603 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:111427600-111456000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 2 | chr3:111442400-111456000 | Weak transcription | Lung | lung |
| 3 | chr3:111442800-111455800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 4 | chr3:111444200-111456000 | Weak transcription | Aorta | Aorta |
| 5 | chr3:111445200-111456800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 6 | chr3:111449000-111455800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 7 | chr3:111449400-111456000 | Weak transcription | Colon Smooth Muscle | Colon |
| 8 | chr3:111449600-111456000 | Weak transcription | Esophagus | oesophagus |
| 9 | chr3:111451600-111460400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 10 | chr3:111452200-111458200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 11 | chr3:111452400-111456000 | Weak transcription | Gastric | stomach |
| 12 | chr3:111452400-111458800 | Enhancers | HMEC | breast |
| 13 | chr3:111452600-111455800 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr3:111452600-111457200 | Enhancers | HSMM | muscle |
| 15 | chr3:111452800-111459200 | Enhancers | Osteobl | bone |
| 16 | chr3:111452800-111460400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 17 | chr3:111453000-111459400 | Enhancers | Placenta Amnion | Placenta Amnion |
| 18 | chr3:111453200-111456200 | Weak transcription | Fetal Kidney | kidney |
| 19 | chr3:111453400-111455800 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 20 | chr3:111453400-111458600 | Enhancers | HSMMtube | muscle |
| 21 | chr3:111453600-111456800 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 22 | chr3:111453600-111456800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 23 | chr3:111453600-111458800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 24 | chr3:111453600-111458800 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 25 | chr3:111453600-111459000 | Enhancers | NHDF-Ad | bronchial |
| 26 | chr3:111453800-111456600 | Enhancers | NHLF | lung |
| 27 | chr3:111453800-111457600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 28 | chr3:111453800-111457600 | Enhancers | NHEK | skin |
| 29 | chr3:111454200-111455800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 30 | chr3:111454200-111455800 | Weak transcription | Pancreas | Pancrea |
| 31 | chr3:111454200-111456000 | Weak transcription | Fetal Intestine Small | intestine |
| 32 | chr3:111454200-111456800 | Enhancers | NH-A | brain |
| 33 | chr3:111454200-111458200 | Enhancers | Hela-S3 | cervix |
| 34 | chr3:111454600-111455800 | Weak transcription | Small Intestine | intestine |
| 35 | chr3:111454600-111458000 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 36 | chr3:111454600-111459400 | Enhancers | HepG2 | liver |
| 37 | chr3:111454600-111459600 | Enhancers | Liver | Liver |
| 38 | chr3:111454800-111455800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 39 | chr3:111454800-111455800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 40 | chr3:111454800-111455800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 41 | chr3:111454800-111456200 | Enhancers | A549 | lung |
| 42 | chr3:111454800-111460400 | Enhancers | Fetal Heart | heart |
| 43 | chr3:111454800-111464400 | Weak transcription | Placenta | Placenta |
| 44 | chr3:111455000-111455800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 45 | chr3:111455000-111455800 | Weak transcription | Primary T cells from cord blood | blood |
| 46 | chr3:111455000-111456000 | Weak transcription | Stomach Mucosa | stomach |
| 47 | chr3:111455000-111456600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 48 | chr3:111455000-111457600 | Weak transcription | HUVEC | blood vessel |
| 49 | chr3:111455000-111461000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 50 | chr3:111455200-111457000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
