Variant report

Variant rs56030157
Chromosome Location chr3:195943481-195943482
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195935000-195946200 Weak transcription Right Atrium heart
2 chr3:195936400-195944800 Weak transcription Spleen Spleen
3 chr3:195938400-195946200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr3:195941200-195943600 Enhancers Duodenum Mucosa Duodenum
5 chr3:195942200-195943800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr3:195942200-195944000 Enhancers ES-WA7 Cell Line embryonic stem cell
7 chr3:195942200-195945000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr3:195942400-195945400 Weak transcription Primary monocytes fromperipheralblood blood
9 chr3:195942400-195946200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:195942400-195946400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:195942600-195943600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
12 chr3:195942600-195945200 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr3:195942800-195943800 Bivalent Enhancer NHEK skin
14 chr3:195942800-195944000 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr3:195943000-195943600 Enhancers Pancreas Pancrea
16 chr3:195943000-195943600 Active TSS Rectal Mucosa Donor 29 rectum
17 chr3:195943000-195943800 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr3:195943000-195943800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
19 chr3:195943000-195943800 Bivalent Enhancer Stomach Mucosa stomach
20 chr3:195943000-195943800 Active TSS HepG2 liver
21 chr3:195943000-195944000 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr3:195943000-195944000 Bivalent Enhancer Fetal Muscle Trunk muscle
23 chr3:195943000-195944000 Enhancers Gastric stomach
24 chr3:195943000-195944200 Active TSS iPS-20b Cell Line embryonic stem cell
25 chr3:195943000-195944800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr3:195943000-195946200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr3:195943200-195943600 Enhancers HUES48 Cell Line embryonic stem cell
28 chr3:195943200-195943600 Active TSS HUES6 Cell Line embryonic stem cell
29 chr3:195943200-195943600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr3:195943200-195943600 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr3:195943200-195943600 Bivalent Enhancer Colonic Mucosa Colon
32 chr3:195943200-195943800 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr3:195943200-195943800 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr3:195943200-195944000 Enhancers Ovary ovary
35 chr3:195943200-195944000 Enhancers Skeletal Muscle Male skeletal muscle
36 chr3:195943200-195944000 Enhancers HMEC breast
37 chr3:195943200-195944200 Active TSS H9 Cell Line embryonic stem cell
38 chr3:195943200-195944200 Active TSS iPS-15b Cell Line embryonic stem cell
39 chr3:195943200-195944200 Active TSS iPS-18 Cell Line embryonic stem cell
40 chr3:195943200-195944200 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
41 chr3:195943200-195944200 Flanking Active TSS Fetal Intestine Large intestine
42 chr3:195943200-195944200 Flanking Active TSS Fetal Intestine Small intestine
43 chr3:195943200-195944200 Bivalent Enhancer Fetal Muscle Leg muscle
44 chr3:195943200-195945400 Weak transcription Fetal Brain Female brain
45 chr3:195943400-195943600 Enhancers HUES64 Cell Line embryonic stem cell
46 chr3:195943400-195943800 Active TSS H1 Cell Line embryonic stem cell
47 chr3:195943400-195943800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
48 chr3:195943400-195943800 Active TSS Liver Liver
49 chr3:195943400-195944400 Weak transcription Fetal Brain Male brain
50 chr3:195943400-195944800 Weak transcription Cortex derived primary cultured neurospheres brain

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