Variant report

Variant rs56036797
Chromosome Location chr22:22215164-22215165
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22192200-22220200 Weak transcription Placenta Placenta
2 chr22:22193000-22219200 Weak transcription NH-A brain
3 chr22:22193200-22217800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr22:22194000-22220400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr22:22201600-22215200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr22:22203000-22219600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr22:22203800-22219400 Enhancers Primary T helper cells fromperipheralblood blood
8 chr22:22205600-22215600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr22:22205800-22215600 Weak transcription NHEK skin
10 chr22:22207800-22217000 Genic enhancers K562 blood
11 chr22:22208200-22219400 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr22:22208400-22217600 Enhancers Fetal Heart heart
13 chr22:22208800-22218600 Enhancers Skeletal Muscle Female skeletal muscle
14 chr22:22208800-22219000 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr22:22209000-22215600 Enhancers Brain Anterior Caudate brain
16 chr22:22209000-22216000 Enhancers Brain Angular Gyrus brain
17 chr22:22209000-22219000 Enhancers Colon Smooth Muscle Colon
18 chr22:22209200-22218400 Weak transcription Brain Germinal Matrix brain
19 chr22:22209200-22220000 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr22:22209400-22219200 Enhancers Primary T helper cells PMA-I stimulated --
21 chr22:22209800-22220200 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr22:22210000-22216200 Enhancers Left Ventricle heart
23 chr22:22210000-22216400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr22:22210000-22219400 Enhancers Primary monocytes fromperipheralblood blood
25 chr22:22210200-22219400 Weak transcription Fetal Kidney kidney
26 chr22:22210400-22218400 Weak transcription Fetal Brain Male brain
27 chr22:22210800-22218200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr22:22210800-22220400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr22:22211000-22216800 Enhancers Primary T cells from cord blood blood
30 chr22:22211400-22219600 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr22:22211400-22220200 Enhancers Primary B cells from peripheral blood blood
32 chr22:22211600-22216400 Enhancers Rectal Mucosa Donor 31 rectum
33 chr22:22211600-22216400 Enhancers Sigmoid Colon Sigmoid Colon
34 chr22:22211600-22219400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr22:22211800-22217400 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr22:22212000-22220600 Weak transcription Placenta Amnion Placenta Amnion
37 chr22:22212000-22221000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
38 chr22:22212200-22218800 Enhancers Primary hematopoietic stem cells blood
39 chr22:22212200-22219600 Enhancers Primary T regulatory cells fromperipheralblood blood
40 chr22:22212600-22215200 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr22:22212600-22215200 Weak transcription Fetal Lung lung
42 chr22:22212600-22216200 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr22:22212600-22218200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr22:22212800-22215200 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr22:22212800-22215800 Enhancers HepG2 liver
46 chr22:22212800-22219000 Weak transcription Fetal Stomach stomach
47 chr22:22213000-22215200 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr22:22213000-22215200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr22:22213000-22215200 Weak transcription Aorta Aorta
50 chr22:22213000-22215600 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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