Variant report
| Variant | rs560415368 |
|---|---|
| Chromosome Location | chr2:153484725-153484726 |
| allele | -/GATGGATGAACCTGAAAA |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:153454800-153496600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr2:153457200-153505000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 3 | chr2:153463800-153502800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 4 | chr2:153464000-153502800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 5 | chr2:153467200-153504000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr2:153468600-153495800 | Weak transcription | Esophagus | oesophagus |
| 7 | chr2:153468800-153492000 | Weak transcription | Liver | Liver |
| 8 | chr2:153469000-153493800 | Weak transcription | Spleen | Spleen |
| 9 | chr2:153469000-153496400 | Weak transcription | Colonic Mucosa | Colon |
| 10 | chr2:153469000-153509800 | Weak transcription | Small Intestine | intestine |
| 11 | chr2:153469200-153495200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 12 | chr2:153469600-153487200 | Weak transcription | Fetal Thymus | thymus |
| 13 | chr2:153469600-153496800 | Weak transcription | HSMM | muscle |
| 14 | chr2:153471000-153507000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 15 | chr2:153472000-153522000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 16 | chr2:153473000-153500600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 17 | chr2:153473800-153496400 | Weak transcription | Osteobl | bone |
| 18 | chr2:153474400-153486200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 19 | chr2:153474400-153505000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 20 | chr2:153474800-153484800 | Weak transcription | Ovary | ovary |
| 21 | chr2:153475800-153493000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 22 | chr2:153476600-153492800 | Weak transcription | Gastric | stomach |
| 23 | chr2:153477200-153484800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 24 | chr2:153477600-153489800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 25 | chr2:153477800-153486200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 26 | chr2:153477800-153488000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 27 | chr2:153477800-153488200 | Weak transcription | Pancreas | Pancrea |
| 28 | chr2:153477800-153488400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 29 | chr2:153477800-153488400 | Weak transcription | Colon Smooth Muscle | Colon |
| 30 | chr2:153477800-153493800 | Weak transcription | HSMMtube | muscle |
| 31 | chr2:153477800-153496000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 32 | chr2:153477800-153496600 | Weak transcription | Aorta | Aorta |
| 33 | chr2:153478200-153487000 | Weak transcription | Brain Germinal Matrix | brain |
| 34 | chr2:153478600-153488600 | Weak transcription | Right Ventricle | heart |
| 35 | chr2:153478800-153486400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 36 | chr2:153479400-153496200 | Weak transcription | NH-A | brain |
| 37 | chr2:153479800-153484800 | Weak transcription | Fetal Brain Female | brain |
| 38 | chr2:153479800-153488600 | Weak transcription | Fetal Intestine Small | intestine |
| 39 | chr2:153481000-153488000 | Strong transcription | HepG2 | liver |
| 40 | chr2:153481000-153490200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 41 | chr2:153481200-153491200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 42 | chr2:153481200-153493400 | Weak transcription | Fetal Brain Male | brain |
| 43 | chr2:153481200-153502200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 44 | chr2:153481200-153502400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 45 | chr2:153481400-153490400 | Strong transcription | NHEK | skin |
| 46 | chr2:153481400-153502400 | Strong transcription | Placenta | Placenta |
| 47 | chr2:153481400-153503000 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 48 | chr2:153481600-153489400 | Strong transcription | HMEC | breast |
| 49 | chr2:153482000-153487000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 50 | chr2:153482000-153490600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
