Variant report

Variant rs560450661
Chromosome Location chr17:15334337-15334338
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15326000-15340200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr17:15326200-15336800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr17:15326400-15335800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr17:15326400-15340600 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr17:15326600-15340200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr17:15326800-15336200 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr17:15328600-15336200 Weak transcription Right Atrium heart
8 chr17:15328800-15339600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr17:15329000-15339400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr17:15329800-15335800 Weak transcription Fetal Lung lung
11 chr17:15329800-15340000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr17:15330200-15336600 Weak transcription Fetal Heart heart
13 chr17:15331000-15339400 Weak transcription Esophagus oesophagus
14 chr17:15332800-15340400 Enhancers Fetal Muscle Leg muscle
15 chr17:15333000-15334600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr17:15333000-15340600 Weak transcription H9 Cell Line embryonic stem cell
17 chr17:15333000-15340600 Weak transcription Aorta Aorta
18 chr17:15333000-15340600 Weak transcription Thymus Thymus
19 chr17:15333200-15334400 Enhancers Placenta Placenta
20 chr17:15333200-15339000 Enhancers Fetal Muscle Trunk muscle
21 chr17:15333400-15337400 Enhancers Skeletal Muscle Female skeletal muscle
22 chr17:15333400-15340400 Enhancers Fetal Stomach stomach
23 chr17:15333600-15335000 Enhancers Rectal Mucosa Donor 29 rectum
24 chr17:15333600-15335400 Enhancers HSMMtube muscle
25 chr17:15333600-15361000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr17:15334000-15334400 Enhancers Psoas Muscle Psoas
27 chr17:15334000-15334400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
28 chr17:15334000-15335000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
29 chr17:15334000-15335200 Enhancers Muscle Satellite Cultured Cells --
30 chr17:15334000-15335200 Enhancers HSMM muscle
31 chr17:15334000-15335400 Enhancers Rectal Smooth Muscle rectum
32 chr17:15334200-15334400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
33 chr17:15334200-15334400 Enhancers Colonic Mucosa Colon
34 chr17:15334200-15334400 Flanking Active TSS Colon Smooth Muscle Colon
35 chr17:15334200-15334400 Enhancers Stomach Smooth Muscle stomach
36 chr17:15334200-15334600 Flanking Active TSS Brain Inferior Temporal Lobe brain
37 chr17:15334200-15334600 Enhancers Brain Substantia Nigra brain
38 chr17:15334200-15334800 Enhancers Lung lung
39 chr17:15334200-15335000 Enhancers Brain Angular Gyrus brain
40 chr17:15334200-15335000 Enhancers Brain Anterior Caudate brain
41 chr17:15334200-15335000 Enhancers Brain Cingulate Gyrus brain
42 chr17:15334200-15335200 Enhancers Brain Hippocampus Middle brain
43 chr17:15334200-15339600 Weak transcription Sigmoid Colon Sigmoid Colon

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