Variant report

Variant	rs560478398
Chromosome Location	chr10:18433971-18433972
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054616	chr10:18433954-18451969	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18430600-18446400	Weak transcription	Brain Angular Gyrus	brain
2	chr10:18430800-18434800	Weak transcription	Left Ventricle	heart
3	chr10:18430800-18442400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr10:18431000-18440600	Weak transcription	Fetal Intestine Small	intestine
5	chr10:18431200-18434600	Weak transcription	Brain Hippocampus Middle	brain
6	chr10:18431200-18437400	Weak transcription	Fetal Stomach	stomach
7	chr10:18431200-18440600	Weak transcription	Aorta	Aorta
8	chr10:18431200-18447800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr10:18431200-18447800	Weak transcription	Fetal Intestine Large	intestine
10	chr10:18431400-18437600	Weak transcription	Right Ventricle	heart
11	chr10:18431400-18440600	Weak transcription	Ovary	ovary
12	chr10:18431400-18441200	Enhancers	Rectal Smooth Muscle	rectum
13	chr10:18431400-18468800	Weak transcription	Brain Cingulate Gyrus	brain
14	chr10:18432200-18435200	Enhancers	Fetal Heart	heart
15	chr10:18432400-18434400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr10:18432400-18440000	Weak transcription	Fetal Brain Male	brain
17	chr10:18432600-18446800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr10:18432600-18448000	Weak transcription	Duodenum Smooth Muscle	Duodenum
19	chr10:18432800-18434600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr10:18433000-18434000	Enhancers	Stomach Smooth Muscle	stomach
21	chr10:18433200-18435400	Enhancers	Colon Smooth Muscle	Colon
22	chr10:18433600-18434200	Enhancers	Primary hematopoietic stem cells	blood
23	chr10:18433600-18434800	Enhancers	Pancreatic Islets	Pancreatic Islet
24	chr10:18433600-18436000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr10:18433800-18434000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr10:18433800-18434200	Enhancers	Pancreas	Pancrea
27	chr10:18433800-18435000	Enhancers	Brain Anterior Caudate	brain
28	chr10:18433800-18435200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr10:18433800-18435400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr10:18433800-18435400	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr10:18433800-18435400	Enhancers	Fetal Lung	lung

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