Variant report

Variant	rs560483809
Chromosome Location	chr15:74016728-74016729
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471252	chr15:74006691-74089793	Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv569970	chr15:74016622-74059081	Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73990600-74018800	Weak transcription	Right Atrium	heart
2	chr15:74007400-74031400	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr15:74009400-74018400	Weak transcription	Left Ventricle	heart
4	chr15:74012800-74018600	Weak transcription	Right Ventricle	heart
5	chr15:74015200-74017200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr15:74015400-74017200	Enhancers	Fetal Lung	lung
7	chr15:74015600-74017000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr15:74015800-74017200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr15:74015800-74017200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr15:74015800-74033400	Weak transcription	Ovary	ovary
11	chr15:74016400-74016800	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr15:74016400-74016800	Enhancers	Fetal Heart	heart
13	chr15:74016600-74016800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr15:74016600-74016800	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr15:74016600-74016800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr15:74016600-74016800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr15:74016600-74016800	Flanking Active TSS	Lung	lung
18	chr15:74016600-74016800	Enhancers	Spleen	Spleen
19	chr15:74016600-74016800	Bivalent Enhancer	Hela-S3	cervix

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links