Variant report

Variant	rs560491051
Chromosome Location	chr3:160695187-160695188
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532666	chr3:159777847-160703202	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	271 gene(s)	inside rSNPs	diseases
2	nsv931072	chr3:160669567-161159779	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
3	nsv1007004	chr3:160695108-160718154	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:160667400-160696000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr3:160670400-160700400	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr3:160678400-160697600	Weak transcription	Primary T cells from cord blood	blood
4	chr3:160687000-160696600	Weak transcription	Right Ventricle	heart
5	chr3:160687000-160698600	Weak transcription	Adipose Nuclei	Adipose
6	chr3:160691600-160695200	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr3:160691600-160695200	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr3:160691600-160695200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr3:160691600-160695200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:160691600-160695200	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr3:160691600-160695600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr3:160691600-160697800	Weak transcription	Primary hematopoietic stem cells	blood
13	chr3:160695000-160696800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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