| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv832537 |
chr1:215509026-215705105 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv1796390 |
chr1:215561548-215799074 |
Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1014266 |
chr1:215573051-215730838 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv430324 |
chr1:215649163-216082605 |
Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv945289 |
chr1:215680875-215699974 |
Enhancers Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015