Variant report

Variant rs56060009
Chromosome Location chr9:117050909-117050910
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117012400-117054400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr9:117013400-117067800 Weak transcription Right Ventricle heart
3 chr9:117026600-117057000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr9:117027800-117056800 Weak transcription Colon Smooth Muscle Colon
5 chr9:117028200-117077000 Weak transcription Gastric stomach
6 chr9:117038200-117052800 Weak transcription Stomach Mucosa stomach
7 chr9:117039800-117076600 Weak transcription Lung lung
8 chr9:117040200-117053000 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr9:117041800-117061800 Weak transcription Aorta Aorta
10 chr9:117043000-117051000 Strong transcription HepG2 liver
11 chr9:117043200-117051800 Strong transcription Liver Liver
12 chr9:117043400-117051800 Genic enhancers Fetal Muscle Leg muscle
13 chr9:117043400-117053800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr9:117043800-117053800 Genic enhancers Fetal Muscle Trunk muscle
15 chr9:117043800-117074800 Strong transcription Fetal Intestine Large intestine
16 chr9:117043800-117075200 Weak transcription Rectal Smooth Muscle rectum
17 chr9:117044200-117057600 Weak transcription Right Atrium heart
18 chr9:117044400-117057000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr9:117044800-117055000 Strong transcription Fetal Intestine Small intestine
20 chr9:117046000-117051000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr9:117046200-117057000 Weak transcription Brain Substantia Nigra brain
22 chr9:117046600-117051200 Genic enhancers Fetal Stomach stomach
23 chr9:117047400-117051800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr9:117047400-117054200 Weak transcription Pancreas Pancrea
25 chr9:117047600-117051400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr9:117047600-117054400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr9:117047600-117056600 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr9:117047800-117057000 Weak transcription Adipose Nuclei Adipose
29 chr9:117047800-117057000 Weak transcription Duodenum Mucosa Duodenum
30 chr9:117048200-117054200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr9:117048400-117054600 Weak transcription HUVEC blood vessel
32 chr9:117048400-117067200 Weak transcription Ovary ovary
33 chr9:117048600-117052800 Weak transcription Fetal Lung lung
34 chr9:117048600-117054400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr9:117049200-117051000 Enhancers HSMMtube muscle
36 chr9:117049200-117052400 Enhancers Fetal Thymus thymus
37 chr9:117049400-117051200 Bivalent Enhancer Placenta Placenta
38 chr9:117049600-117051800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr9:117049800-117051000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr9:117049800-117051000 Enhancers Muscle Satellite Cultured Cells --
41 chr9:117049800-117051200 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr9:117049800-117051200 Enhancers HSMM muscle
43 chr9:117049800-117053800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr9:117050000-117051000 Enhancers H1 Cell Line embryonic stem cell
45 chr9:117050000-117051000 Enhancers Esophagus oesophagus
46 chr9:117050000-117051000 Enhancers NHDF-Ad bronchial
47 chr9:117050000-117051200 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr9:117050000-117051200 Enhancers Stomach Smooth Muscle stomach
49 chr9:117050000-117051200 Enhancers NH-A brain
50 chr9:117050000-117051400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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