Variant report

Variant	rs560600964
Chromosome Location	chr3:141580861-141580862
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949709	chr3:141295050-142178144	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
2	nsv1013352	chr3:141541105-141870293	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
3	nsv965218	chr3:141580574-141584429	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:141573000-141582000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr3:141578400-141581000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr3:141579400-141583200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr3:141579800-141582000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr3:141579800-141582000	Weak transcription	Left Ventricle	heart
6	chr3:141579800-141583800	Weak transcription	Lung	lung
7	chr3:141580000-141584000	Weak transcription	Right Ventricle	heart
8	chr3:141580200-141582400	Weak transcription	Adipose Nuclei	Adipose
9	chr3:141580400-141581800	Enhancers	K562	blood
10	chr3:141580600-141582000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr3:141580600-141582200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr3:141580800-141581000	Enhancers	Placenta	Placenta
13	chr3:141580800-141588600	Weak transcription	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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