Variant report

Variant	rs560611884
Chromosome Location	chr1:213476448-213476449
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:213468429..213469954-chr1:213475460..213478038,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3392967	chr1:213271844-213490132	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	esv3381460	chr1:213476429-213478577	Active TSS Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213474800-213487400	Weak transcription	Right Atrium	heart
2	chr1:213476200-213476800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr1:213476200-213477000	Enhancers	H9 Cell Line	embryonic stem cell
4	chr1:213476200-213477000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr1:213476400-213476600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
6	chr1:213476400-213476600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr1:213476400-213476800	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
8	chr1:213476400-213476800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
9	chr1:213476400-213476800	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
10	chr1:213476400-213476800	Enhancers	HSMM	muscle
11	chr1:213476400-213477000	Enhancers	H1 Cell Line	embryonic stem cell
12	chr1:213476400-213477000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr1:213476400-213477000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr1:213476400-213477000	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr1:213476400-213477000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr1:213476400-213477000	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr1:213476400-213477000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr1:213476400-213477000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr1:213476400-213477000	Enhancers	Fetal Muscle Leg	muscle
20	chr1:213476400-213477000	Enhancers	Pancreas	Pancrea
21	chr1:213476400-213477000	Enhancers	HepG2	liver
22	chr1:213476400-213477000	Enhancers	K562	blood
23	chr1:213476400-213477000	Enhancers	Osteobl	bone

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