Variant report

Variant	rs560619863
Chromosome Location	chr6:69427091-69427092
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv970728	chr6:69426786-69430815	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69420200-69428600	Weak transcription	Fetal Brain Female	brain
2	chr6:69421400-69436400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:69421800-69428200	Weak transcription	Brain Anterior Caudate	brain
4	chr6:69423600-69428000	Weak transcription	Brain Cingulate Gyrus	brain
5	chr6:69425600-69428200	Weak transcription	Brain Angular Gyrus	brain
6	chr6:69425800-69427800	Weak transcription	Fetal Heart	heart
7	chr6:69425800-69428000	Enhancers	K562	blood
8	chr6:69425800-69428600	Weak transcription	Brain Substantia Nigra	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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