The 2.0 version of rSNPBase

Variant report

Variant rs560711677
Chromosome Location chr8:100252548-100252549
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100207000-100290400 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr8:100212600-100253000 Weak transcription Lung lung
3 chr8:100214800-100252600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr8:100214800-100293200 Weak transcription Primary T cells fromperipheralblood blood
5 chr8:100230400-100257800 Weak transcription Aorta Aorta
6 chr8:100231000-100253000 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr8:100231000-100255400 Weak transcription Right Ventricle heart
8 chr8:100231200-100253000 Weak transcription Gastric stomach
9 chr8:100232000-100267400 Weak transcription Left Ventricle heart
10 chr8:100236400-100253000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr8:100236600-100252600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr8:100236800-100253000 Weak transcription Osteobl bone
13 chr8:100241200-100255400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr8:100243200-100253000 Weak transcription Brain Substantia Nigra brain
15 chr8:100243400-100253000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr8:100244400-100253000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr8:100244400-100253000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr8:100246400-100252600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr8:100246400-100253000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr8:100246400-100288200 Weak transcription Primary T cells from cord blood blood
21 chr8:100246600-100252800 Weak transcription HSMMtube muscle
22 chr8:100246600-100253000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr8:100246600-100253000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr8:100246600-100253000 Weak transcription Dnd41 blood
25 chr8:100246600-100253200 Weak transcription Fetal Lung lung
26 chr8:100246600-100253200 Weak transcription NHLF lung
27 chr8:100246600-100256200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr8:100246600-100261000 Weak transcription Primary monocytes fromperipheralblood blood
29 chr8:100246600-100267000 Weak transcription Primary B cells from cord blood blood
30 chr8:100246800-100253000 Weak transcription Fetal Intestine Large intestine
31 chr8:100246800-100253000 Weak transcription Fetal Muscle Leg muscle
32 chr8:100246800-100253200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr8:100246800-100253200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr8:100246800-100253200 Weak transcription Fetal Stomach stomach
35 chr8:100246800-100261000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr8:100246800-100262000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr8:100246800-100266800 Weak transcription Fetal Intestine Small intestine
38 chr8:100251600-100253000 Weak transcription NHDF-Ad bronchial
39 chr8:100251600-100253600 Enhancers GM12878-XiMat blood
40 chr8:100251600-100260000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr8:100251800-100253000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr8:100252000-100269200 Weak transcription Ovary ovary
43 chr8:100252200-100253400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr8:100252400-100252600 Enhancers Primary hematopoietic stem cells blood
45 chr8:100252400-100252800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr8:100252400-100252800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr8:100252400-100252800 Weak transcription Thymus Thymus
48 chr8:100252400-100253200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015